| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345500
Identifier: 29345500
GI number: 29345500
Start: 83372
End: 84397
Strand: Reverse
Name: 29345500
Synonym: BT_0090
Alternate gene names: NA
Gene position: 84397-83372 (Counterclockwise)
Preceding gene: 29345501
Following gene: 29345499
Centisome position: 1.35
GC content: 47.95
Gene sequence:
>1026_bases ATGTTATTAGCAATCGAATTTGATAACCTGCATCAGATACTCCGTAGTTTATACACGGATATGATGCCGTTATGCGGGAA CATGGCGGGGGTAGCCAAAGGAATAGCGGGACTGGGGGCTTTGTTCTATGTGGCTGCCAAAGTATGGCAGTCGCTCGCCA GTGCCGAACCGATAGACGTTTACCCTTTGCTCCGTCCTTTTGTGATTGGTTTCTGTATTATGTTCTTCCCCACATTCGTA CTGGGTACGATTAACAGCGTGATGTCGCCAGTAGTCAAGGGGTGTAACAATATGCTCGAAACGCAAACTTTCGATATGAA CGCCTACCGGGAACAAAAGGACAAACTGGAATATGAAGCGATGGTGCGTAATCCGGAAACGGCTTACCTTGTTTCGGATG AAGCGTTTGATAAACAGATTGACGAATTGGGATGGTCTGCCAAAGATATTGCCACAATGGGCGGTATGTACATGGATAGG GCAGCCCACAATATCAAGCAATCCGTCCGGGACTGGTTCAGGGAATTGTTGGAACTGCTCTTTCAATCGGCAGCCCTCGT GATAGACACTATCCGAACCTTTTTCTTGATTGTCCTTGCCATACTGGGTCCGATAGCCTTTGCCATCAGTGTATATGATG GCTTTCAGGCGACACTGACCCAATGGATAACAAGGTACATTTCCGTTTACCTGTGGCTACCCGTTTCAGACCTGTTCAGT TCCATTCTTGCCCGAATACAGGTGCTTATGCTCCAAAAGGATATTCAGGAGCTATCAGACCCCAATTTTGTACCCGATAG CAGCAATTCAGTGTACATAATCTTTATGATAATCGGTATCATCGGTTACTTCACCATCCCCACCGTATCGAACTGGATTA TTCAGGCGGGCGGAATGGGCAACATGAGCCGGAATATAAACAGTGCAGCCAATAAAACGGGCAGTGGCGTTGGTGCGGTA GCCGGAGCAGCCACCGGGAACGCTGGCGGCAGGGTCGGCGGTAAACTAATCAAAGGTAATCAATAA
Upstream 100 bases:
>100_bases TTCCTACCTGCGGGCGAAAAAGAAAAAGGACACTGACCGGGTAATGGCTTTGTACGGTTCGGCGGATGAACGTTACTGGT AACTTCTAAAAATAAGTAGT
Downstream 100 bases:
>100_bases TTAAAAATCAAGATGGAATTTAAAAGTTTAAAGAACATTGAAACCAGTTTCAAACAGATACGTCTTTTCGGGATTGTGTT TGTCGTTATGTGTACCCTGA
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLLAIEFDNLHQILRSLYTDMMPLCGNMAGVAKGIAGLGALFYVAAKVWQSLASAEPIDVYPLLRPFVIGFCIMFFPTFV LGTINSVMSPVVKGCNNMLETQTFDMNAYREQKDKLEYEAMVRNPETAYLVSDEAFDKQIDELGWSAKDIATMGGMYMDR AAHNIKQSVRDWFRELLELLFQSAALVIDTIRTFFLIVLAILGPIAFAISVYDGFQATLTQWITRYISVYLWLPVSDLFS SILARIQVLMLQKDIQELSDPNFVPDSSNSVYIIFMIIGIIGYFTIPTVSNWIIQAGGMGNMSRNINSAANKTGSGVGAV AGAATGNAGGRVGGKLIKGNQ
Sequences:
>Translated_341_residues MLLAIEFDNLHQILRSLYTDMMPLCGNMAGVAKGIAGLGALFYVAAKVWQSLASAEPIDVYPLLRPFVIGFCIMFFPTFV LGTINSVMSPVVKGCNNMLETQTFDMNAYREQKDKLEYEAMVRNPETAYLVSDEAFDKQIDELGWSAKDIATMGGMYMDR AAHNIKQSVRDWFRELLELLFQSAALVIDTIRTFFLIVLAILGPIAFAISVYDGFQATLTQWITRYISVYLWLPVSDLFS SILARIQVLMLQKDIQELSDPNFVPDSSNSVYIIFMIIGIIGYFTIPTVSNWIIQAGGMGNMSRNINSAANKTGSGVGAV AGAATGNAGGRVGGKLIKGNQ >Mature_341_residues MLLAIEFDNLHQILRSLYTDMMPLCGNMAGVAKGIAGLGALFYVAAKVWQSLASAEPIDVYPLLRPFVIGFCIMFFPTFV LGTINSVMSPVVKGCNNMLETQTFDMNAYREQKDKLEYEAMVRNPETAYLVSDEAFDKQIDELGWSAKDIATMGGMYMDR AAHNIKQSVRDWFRELLELLFQSAALVIDTIRTFFLIVLAILGPIAFAISVYDGFQATLTQWITRYISVYLWLPVSDLFS SILARIQVLMLQKDIQELSDPNFVPDSSNSVYIIFMIIGIIGYFTIPTVSNWIIQAGGMGNMSRNINSAANKTGSGVGAV AGAATGNAGGRVGGKLIKGNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37530; Mature: 37530
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAIEFDNLHQILRSLYTDMMPLCGNMAGVAKGIAGLGALFYVAAKVWQSLASAEPIDV CEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YPLLRPFVIGFCIMFFPTFVLGTINSVMSPVVKGCNNMLETQTFDMNAYREQKDKLEYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MVRNPETAYLVSDEAFDKQIDELGWSAKDIATMGGMYMDRAAHNIKQSVRDWFRELLELL HHCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQSAALVIDTIRTFFLIVLAILGPIAFAISVYDGFQATLTQWITRYISVYLWLPVSDLFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH SILARIQVLMLQKDIQELSDPNFVPDSSNSVYIIFMIIGIIGYFTIPTVSNWIIQAGGMG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC NMSRNINSAANKTGSGVGAVAGAATGNAGGRVGGKLIKGNQ CCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLAIEFDNLHQILRSLYTDMMPLCGNMAGVAKGIAGLGALFYVAAKVWQSLASAEPIDV CEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YPLLRPFVIGFCIMFFPTFVLGTINSVMSPVVKGCNNMLETQTFDMNAYREQKDKLEYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MVRNPETAYLVSDEAFDKQIDELGWSAKDIATMGGMYMDRAAHNIKQSVRDWFRELLELL HHCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQSAALVIDTIRTFFLIVLAILGPIAFAISVYDGFQATLTQWITRYISVYLWLPVSDLFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH SILARIQVLMLQKDIQELSDPNFVPDSSNSVYIIFMIIGIIGYFTIPTVSNWIIQAGGMG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC NMSRNINSAANKTGSGVGAVAGAATGNAGGRVGGKLIKGNQ CCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA