Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345498

Identifier: 29345498

GI number: 29345498

Start: 82427

End: 82732

Strand: Reverse

Name: 29345498

Synonym: BT_0088

Alternate gene names: NA

Gene position: 82732-82427 (Counterclockwise)

Preceding gene: 29345499

Following gene: 29345497

Centisome position: 1.32

GC content: 46.41

Gene sequence:

>306_bases
ATGATACGGAAAATTCTCTCTCCGGTGAATCAGGCAATTACCCATGTGCAGGACTGGGCGGATGAAAAACTCCGCCGCCT
GTGCGGGCGCATGACACCGGAAATAAGGCTGGCGGTAATCCTGCTTATGCTCCTGTTCTTCGGCGGGCTATCCATCTACT
TTACGGTATCATCCATTTACCGGATAGGAAAAGAGGATGGCGAAACCATACGGATAGAACACATCAGGCAGTTGCAGTTA
CAAAGTAAAGACAGTACGAACATTTTTAATCAGTCAGACAATGGAAGAAAAAGAAGTGAAGAATGA

Upstream 100 bases:

>100_bases
ATTAAACGCCGTAAGAAGTGATAATAACCCGCACGGCTTTATGATGGAAAGTTTCGAGATAACGGAAAACAAGGACTTGA
ACACCATAAAGCGGTAAGCC

Downstream 100 bases:

>100_bases
AGTTCCCACACCGGAAACGGCAAAGGGAAAAGAACCTGAAAAACAGGGAAAGGAAAAAAAGGAACTGACCCCACAGCAGA
TACAGCAACGAAAAAAGATG

Product: conjugate transposon protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIRKILSPVNQAITHVQDWADEKLRRLCGRMTPEIRLAVILLMLLFFGGLSIYFTVSSIYRIGKEDGETIRIEHIRQLQL
QSKDSTNIFNQSDNGRKRSEE

Sequences:

>Translated_101_residues
MIRKILSPVNQAITHVQDWADEKLRRLCGRMTPEIRLAVILLMLLFFGGLSIYFTVSSIYRIGKEDGETIRIEHIRQLQL
QSKDSTNIFNQSDNGRKRSEE
>Mature_101_residues
MIRKILSPVNQAITHVQDWADEKLRRLCGRMTPEIRLAVILLMLLFFGGLSIYFTVSSIYRIGKEDGETIRIEHIRQLQL
QSKDSTNIFNQSDNGRKRSEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11749; Mature: 11749

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKILSPVNQAITHVQDWADEKLRRLCGRMTPEIRLAVILLMLLFFGGLSIYFTVSSIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RIGKEDGETIRIEHIRQLQLQSKDSTNIFNQSDNGRKRSEE
HHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRKILSPVNQAITHVQDWADEKLRRLCGRMTPEIRLAVILLMLLFFGGLSIYFTVSSIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RIGKEDGETIRIEHIRQLQLQSKDSTNIFNQSDNGRKRSEE
HHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA