Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345499

Identifier: 29345499

GI number: 29345499

Start: 82736

End: 83359

Strand: Reverse

Name: 29345499

Synonym: BT_0089

Alternate gene names: NA

Gene position: 83359-82736 (Counterclockwise)

Preceding gene: 29345500

Following gene: 29345498

Centisome position: 1.33

GC content: 45.83

Gene sequence:

>624_bases
ATGGAATTTAAAAGTTTAAAGAACATTGAAACCAGTTTCAAACAGATACGTCTTTTCGGGATTGTGTTTGTCGTTATGTG
TACCCTGATAACGGGGTATGCCGTTTGGAACTCCTACACGTTTGCCGAAGCGCAACGGCAAAAGATTTATGTGCTGGACG
GTGGCAAATCGTTGATGCTTGCGCTTTCGCAAGACCTGACACAAAACCGTCCGGTCGAAGCAAGGGAACACGTGAAGCGT
TTTCACGAACTCTTTTTCACGCTCTCACCGGATAAGAACGCTATCGAAAGCAATATCAAACGGTCGCTGTTCCTCGACGA
CAAGAGCGCATTTAACTATTACCGTGACCTCTCGGAAAAGGGATATTACAACCGTATCATTTCGGGCAATATCAGCCAGA
CCATACAGATAGACAGCGTTTCATGCAATTTCGATGTGTACCCGTATGCGGTGGCTACCTATGCCCGCCAAATGATTATC
CGTGAAAGCAGCGTGACGGAAAGAAGCCTTGTCACCCGTTGCCGGTTATTAAACGCCGTAAGAAGTGATAATAACCCGCA
CGGCTTTATGATGGAAAGTTTCGAGATAACGGAAAACAAGGACTTGAACACCATAAAGCGGTAA

Upstream 100 bases:

>100_bases
GGGCAGTGGCGTTGGTGCGGTAGCCGGAGCAGCCACCGGGAACGCTGGCGGCAGGGTCGGCGGTAAACTAATCAAAGGTA
ATCAATAATTAAAAATCAAG

Downstream 100 bases:

>100_bases
GCCATGATACGGAAAATTCTCTCTCCGGTGAATCAGGCAATTACCCATGTGCAGGACTGGGCGGATGAAAAACTCCGCCG
CCTGTGCGGGCGCATGACAC

Product: conjugate transposon protein

Products: NA

Alternate protein names: Plasmid Transfer Protein; F Pilus Assembly Protein TraK; Conjugate Transposon Protein; Conjugate Transposon Protein TraK; Transposon TraK Protein; Conserved Protein Found In Conjugate Transposon TraK

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MEFKSLKNIETSFKQIRLFGIVFVVMCTLITGYAVWNSYTFAEAQRQKIYVLDGGKSLMLALSQDLTQNRPVEAREHVKR
FHELFFTLSPDKNAIESNIKRSLFLDDKSAFNYYRDLSEKGYYNRIISGNISQTIQIDSVSCNFDVYPYAVATYARQMII
RESSVTERSLVTRCRLLNAVRSDNNPHGFMMESFEITENKDLNTIKR

Sequences:

>Translated_207_residues
MEFKSLKNIETSFKQIRLFGIVFVVMCTLITGYAVWNSYTFAEAQRQKIYVLDGGKSLMLALSQDLTQNRPVEAREHVKR
FHELFFTLSPDKNAIESNIKRSLFLDDKSAFNYYRDLSEKGYYNRIISGNISQTIQIDSVSCNFDVYPYAVATYARQMII
RESSVTERSLVTRCRLLNAVRSDNNPHGFMMESFEITENKDLNTIKR
>Mature_207_residues
MEFKSLKNIETSFKQIRLFGIVFVVMCTLITGYAVWNSYTFAEAQRQKIYVLDGGKSLMLALSQDLTQNRPVEAREHVKR
FHELFFTLSPDKNAIESNIKRSLFLDDKSAFNYYRDLSEKGYYNRIISGNISQTIQIDSVSCNFDVYPYAVATYARQMII
RESSVTERSLVTRCRLLNAVRSDNNPHGFMMESFEITENKDLNTIKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24051; Mature: 24051

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKSLKNIETSFKQIRLFGIVFVVMCTLITGYAVWNSYTFAEAQRQKIYVLDGGKSLML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCEEH
ALSQDLTQNRPVEAREHVKRFHELFFTLSPDKNAIESNIKRSLFLDDKSAFNYYRDLSEK
HHHHHHHCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHEECCHHHHHHHHHHHCC
GYYNRIISGNISQTIQIDSVSCNFDVYPYAVATYARQMIIRESSVTERSLVTRCRLLNAV
CCHHHEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RSDNNPHGFMMESFEITENKDLNTIKR
HCCCCCCCEEEEEEECCCCCCCHHHCC
>Mature Secondary Structure
MEFKSLKNIETSFKQIRLFGIVFVVMCTLITGYAVWNSYTFAEAQRQKIYVLDGGKSLML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCEEH
ALSQDLTQNRPVEAREHVKRFHELFFTLSPDKNAIESNIKRSLFLDDKSAFNYYRDLSEK
HHHHHHHCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHEECCHHHHHHHHHHHCC
GYYNRIISGNISQTIQIDSVSCNFDVYPYAVATYARQMIIRESSVTERSLVTRCRLLNAV
CCHHHEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RSDNNPHGFMMESFEITENKDLNTIKR
HCCCCCCCEEEEEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA