Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345433

Identifier: 29345433

GI number: 29345433

Start: 19601

End: 19966

Strand: Reverse

Name: 29345433

Synonym: BT_0023

Alternate gene names: NA

Gene position: 19966-19601 (Counterclockwise)

Preceding gene: 29345434

Following gene: 29345431

Centisome position: 0.32

GC content: 37.98

Gene sequence:

>366_bases
ATGGTGCAGTACATAAATAAGCTACTGAAACAGAGTTTTTTTAATCTGAATGAGAAATGGGAAGAAAAATATCCTATCGT
CATCAAGTCATGGCAGGACAACTGGGAAAAACTTACTGAATACTTCCAGTTCACATCAGATATACGCCGTATGATTTATA
CCACAAATACAATTGAAGGCTATCATCGTCAGATACGGAAAGTGACAAAAAACAAGGGTGTGTTCCCTAACGACACCACC
CTTGAAAAACTGGTTTACCTCGCTTATCGCAACATACGTAAGAAATGGACTATGCCACTGGCTAACTGGGAAGCCATTAC
TCAACAACTGGCGATAAAATTTGGAGATAAGTTTAAATTCTTGTAA

Upstream 100 bases:

>100_bases
ACAATATTACAACTTTGTATCGTCTACCAGATACGGAACTCCATTAAATATGTCGGTAGTAAGCATCAGAAGGAATTCCT
CAAAAACTTGAAACGGGTTT

Downstream 100 bases:

>100_bases
TTTTACGCTCGTCGGGACGGTTAGTCCCGCCCATTGGCGCCGGGCCGTTCCTAGACCGATGAGATTGAATGAGAATAGAG
CATGACACAGTTTAATTTAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MVQYINKLLKQSFFNLNEKWEEKYPIVIKSWQDNWEKLTEYFQFTSDIRRMIYTTNTIEGYHRQIRKVTKNKGVFPNDTT
LEKLVYLAYRNIRKKWTMPLANWEAITQQLAIKFGDKFKFL

Sequences:

>Translated_121_residues
MVQYINKLLKQSFFNLNEKWEEKYPIVIKSWQDNWEKLTEYFQFTSDIRRMIYTTNTIEGYHRQIRKVTKNKGVFPNDTT
LEKLVYLAYRNIRKKWTMPLANWEAITQQLAIKFGDKFKFL
>Mature_121_residues
MVQYINKLLKQSFFNLNEKWEEKYPIVIKSWQDNWEKLTEYFQFTSDIRRMIYTTNTIEGYHRQIRKVTKNKGVFPNDTT
LEKLVYLAYRNIRKKWTMPLANWEAITQQLAIKFGDKFKFL

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 14854; Mature: 14854

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQYINKLLKQSFFNLNEKWEEKYPIVIKSWQDNWEKLTEYFQFTSDIRRMIYTTNTIEG
CHHHHHHHHHHHHHCCCHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
YHRQIRKVTKNKGVFPNDTTLEKLVYLAYRNIRKKWTMPLANWEAITQQLAIKFGDKFKF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
L
C
>Mature Secondary Structure
MVQYINKLLKQSFFNLNEKWEEKYPIVIKSWQDNWEKLTEYFQFTSDIRRMIYTTNTIEG
CHHHHHHHHHHHHHCCCHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
YHRQIRKVTKNKGVFPNDTTLEKLVYLAYRNIRKKWTMPLANWEAITQQLAIKFGDKFKF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]