Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345431

Identifier: 29345431

GI number: 29345431

Start: 18251

End: 18919

Strand: Reverse

Name: 29345431

Synonym: BT_0021

Alternate gene names: NA

Gene position: 18919-18251 (Counterclockwise)

Preceding gene: 29345433

Following gene: 29345417

Centisome position: 0.3

GC content: 38.57

Gene sequence:

>669_bases
ATGTTCAGAGCCAGACAAACTTCCTGGGTATCCAGTCATTTCTCCCTTTTAACTGTTCCAAACTTCTTTTTAACGGCTTC
AACTTGTACAGATAAATCCTTAACTTGCTGTTTTAACCGTAAATACGCACTTTTTTCTATAACAATTAATTCCATAACAA
ATTTGATTTATGATTTTACTATTTACAAAGCAAATAAAAGCACATTTCAACATCCGACAAAACTTCCTAAATCAAAGTCA
CCTGTTGGCGCACATTGTCACTCCTCAAAATACAAGATATTAAGAAGTGACCTGAAATATTTCCATACTACTATTCCTTT
ACCCATATTTGCTCAAACCAAAACTTTAATAATCTCAATCATAAAAGGAAATGCCTGTTACCTGCATCCATGCAGTAACG
AGCATTCCACCCCTCACCAGTTTTCCGTTATCCTACATCTTTATACCTTTGCTTTTCTGCACAACCGCCTTTTCCTTTAC
GTCCGCTTTTTGCCGTGTCTTCGGAAAATGCTCCTTCAACAGCTTCCCTCCAGTTTCTTCGCCTTCTCCTGCAGCTCATC
ATACACATCCCATCTGTTCCGGCCCAGCAACTTGTTTTCTATCTTTTCAAATTTTTCATGGAAACTGAACTCGTCCGGAT
ATTCATCTGTCAGCCCGTCTCTCGGATAA

Upstream 100 bases:

>100_bases
TATTCTGACCAAATCACTTTCCTTGTACATATATTTTCCACCAATGAAAGAACATGGAATGATCCCATAATCCCTATAAC
TTTGTAAACTTCGTTTAGAG

Downstream 100 bases:

>100_bases
CCTTTGTCCATGATATATAGCAGTGTCATCCGGTCATAATTATGTTGGCTCCGCGTCAGTCCTAGCCCCTTGCCTGCATC
AGTCAACCTGTAATAGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFTIYKANKSTFQHPTKLPKSKS
PVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISIIKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLY
VRFLPCLRKMLLQQLPSSFFAFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG

Sequences:

>Translated_222_residues
MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFTIYKANKSTFQHPTKLPKSKS
PVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISIIKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLY
VRFLPCLRKMLLQQLPSSFFAFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG
>Mature_222_residues
MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFTIYKANKSTFQHPTKLPKSKS
PVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISIIKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLY
VRFLPCLRKMLLQQLPSSFFAFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25421; Mature: 25421

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFT
CCCCCCCHHHHHCEEEEEECCEEEEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHEE
IYKANKSTFQHPTKLPKSKSPVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISI
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHEEEEEE
IKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLYVRFLPCLRKMLLQQLPSSFF
EECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHE
AFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG
EEECCCHHHHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFT
CCCCCCCHHHHHCEEEEEECCEEEEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHEE
IYKANKSTFQHPTKLPKSKSPVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISI
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHEEEEEE
IKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLYVRFLPCLRKMLLQQLPSSFF
EECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHE
AFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG
EEECCCHHHHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA