| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345431
Identifier: 29345431
GI number: 29345431
Start: 18251
End: 18919
Strand: Reverse
Name: 29345431
Synonym: BT_0021
Alternate gene names: NA
Gene position: 18919-18251 (Counterclockwise)
Preceding gene: 29345433
Following gene: 29345417
Centisome position: 0.3
GC content: 38.57
Gene sequence:
>669_bases ATGTTCAGAGCCAGACAAACTTCCTGGGTATCCAGTCATTTCTCCCTTTTAACTGTTCCAAACTTCTTTTTAACGGCTTC AACTTGTACAGATAAATCCTTAACTTGCTGTTTTAACCGTAAATACGCACTTTTTTCTATAACAATTAATTCCATAACAA ATTTGATTTATGATTTTACTATTTACAAAGCAAATAAAAGCACATTTCAACATCCGACAAAACTTCCTAAATCAAAGTCA CCTGTTGGCGCACATTGTCACTCCTCAAAATACAAGATATTAAGAAGTGACCTGAAATATTTCCATACTACTATTCCTTT ACCCATATTTGCTCAAACCAAAACTTTAATAATCTCAATCATAAAAGGAAATGCCTGTTACCTGCATCCATGCAGTAACG AGCATTCCACCCCTCACCAGTTTTCCGTTATCCTACATCTTTATACCTTTGCTTTTCTGCACAACCGCCTTTTCCTTTAC GTCCGCTTTTTGCCGTGTCTTCGGAAAATGCTCCTTCAACAGCTTCCCTCCAGTTTCTTCGCCTTCTCCTGCAGCTCATC ATACACATCCCATCTGTTCCGGCCCAGCAACTTGTTTTCTATCTTTTCAAATTTTTCATGGAAACTGAACTCGTCCGGAT ATTCATCTGTCAGCCCGTCTCTCGGATAA
Upstream 100 bases:
>100_bases TATTCTGACCAAATCACTTTCCTTGTACATATATTTTCCACCAATGAAAGAACATGGAATGATCCCATAATCCCTATAAC TTTGTAAACTTCGTTTAGAG
Downstream 100 bases:
>100_bases CCTTTGTCCATGATATATAGCAGTGTCATCCGGTCATAATTATGTTGGCTCCGCGTCAGTCCTAGCCCCTTGCCTGCATC AGTCAACCTGTAATAGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFTIYKANKSTFQHPTKLPKSKS PVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISIIKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLY VRFLPCLRKMLLQQLPSSFFAFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG
Sequences:
>Translated_222_residues MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFTIYKANKSTFQHPTKLPKSKS PVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISIIKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLY VRFLPCLRKMLLQQLPSSFFAFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG >Mature_222_residues MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFTIYKANKSTFQHPTKLPKSKS PVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISIIKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLY VRFLPCLRKMLLQQLPSSFFAFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25421; Mature: 25421
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFT CCCCCCCHHHHHCEEEEEECCEEEEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHEE IYKANKSTFQHPTKLPKSKSPVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISI EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHEEEEEE IKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLYVRFLPCLRKMLLQQLPSSFF EECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHE AFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG EEECCCHHHHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MFRARQTSWVSSHFSLLTVPNFFLTASTCTDKSLTCCFNRKYALFSITINSITNLIYDFT CCCCCCCHHHHHCEEEEEECCEEEEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHEE IYKANKSTFQHPTKLPKSKSPVGAHCHSSKYKILRSDLKYFHTTIPLPIFAQTKTLIISI EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHEEEEEE IKGNACYLHPCSNEHSTPHQFSVILHLYTFAFLHNRLFLYVRFLPCLRKMLLQQLPSSFF EECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHE AFSCSSSYTSHLFRPSNLFSIFSNFSWKLNSSGYSSVSPSLG EEECCCHHHHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA