Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345417

Identifier: 29345417

GI number: 29345417

Start: 4457

End: 4849

Strand: Reverse

Name: 29345417

Synonym: BT_0007

Alternate gene names: NA

Gene position: 4849-4457 (Counterclockwise)

Preceding gene: 29345431

Following gene: NA

Centisome position: 0.08

GC content: 36.64

Gene sequence:

>393_bases
GTGCATCCTCCCCGAAGAGTATCGGAGTTTCTTTTATCGGTCTTGCCATTATTGCCTCCTTTCTCTATTGTTATCTGCAA
AGGTAATGCTATTTATGCAAATACACAAACGGTCAAGGGGTTATCTTTATTTCCGTATATGTCCCATTCTGTCAAAGAGC
GATTGTTTTTCAAGGCCAGAGCTATTTCTCCAATGACGATAGACAGCTCTGCCTTAAAGTCATTAAAAAAGGTTATCCCA
GTGGATTTTCTTCTTGGTTTCTATTCCTTACGTGTTACTATATATGTCATTTTATTATTGTTAACACATAAAATTTCATG
GTCTGCTTATTTCCAATGCCTCAATTGCATTTATCGTATCCTTAGGATATTCAAAATGCACGGAATCACATGA

Upstream 100 bases:

>100_bases
TCTTTAAAAATGCTCATGATGTACTTATAATCCCGTTTTATCTCTTCCAGCTTTTCCGGAGTCTCTTTCGGTGGATTTTT
CATCCGCGCTTCAAATCTCC

Downstream 100 bases:

>100_bases
ATGCTCCACTCTGACCTCCGCAGATCGATATTCCTTTGACTTCTTGGGTGCATCCCACGATTTGTTACTCAAAAAGACAC
GATACTCATAGATACATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKARAISPMTIDSSALKSLKKVIP
VDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRILRIFKMHGIT

Sequences:

>Translated_130_residues
MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKARAISPMTIDSSALKSLKKVIP
VDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRILRIFKMHGIT
>Mature_130_residues
MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKARAISPMTIDSSALKSLKKVIP
VDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRILRIFKMHGIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14908; Mature: 14908

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKAR
CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
AISPMTIDSSALKSLKKVIPVDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRI
CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LRIFKMHGIT
HHHHHHHCCC
>Mature Secondary Structure
MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKAR
CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
AISPMTIDSSALKSLKKVIPVDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRI
CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LRIFKMHGIT
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA