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The map label for this gene is yjiX [H]

Identifier: 29144815

GI number: 29144815

Start: 4734544

End: 4734747

Strand: Reverse

Name: yjiX [H]

Synonym: t4581

Alternate gene names: 29144815

Gene position: 4734747-4734544 (Counterclockwise)

Preceding gene: 29144816

Following gene: 29144814

Centisome position: 98.81

GC content: 48.04

Gene sequence:

>204_bases
ATGTTTGATACTTTAGGTCAGGCAAAAAAATATCTCGGCCAGGCGGCAAAAATGTTGATTGGTATTCCGGACTACGACAA
CTATGTCGAGCACATGAAAACCAACCATCCCGACAAGCCGTACATGACCTATGAAGAGTTCTTCCGCGAACGTCAGCAAG
CACGTTACGGCGGCGATGGCAAAGGCGGTATGCGCTGTTGTTAA

Upstream 100 bases:

>100_bases
CACTAAAACTGATGCCGGGTAGCGCACAGCGATCCCGGCTAGTGTAGGCCGGATAAGGCGCAAGCCGCCATCCGGCTTTA
TTCATTAACAGGACGGCAGA

Downstream 100 bases:

>100_bases
TGGAGAGACTATGACCCCGATTGCAGTTACCCTACTTACCGGTTTTCTTGGTGCCGGCAAAACCACCCTACTACGCCATA
TCCTCAACGAACAACATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MFDTLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTYEEFFRERQQARYGGDGKGGMRCC

Sequences:

>Translated_67_residues
MFDTLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTYEEFFRERQQARYGGDGKGGMRCC
>Mature_67_residues
MFDTLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTYEEFFRERQQARYGGDGKGGMRCC

Specific function: Unknown

COG id: COG2879

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybdD [H]

Homologues:

Organism=Escherichia coli, GI1790813, Length=67, Percent_Identity=94.0298507462687, Blast_Score=135, Evalue=5e-34,
Organism=Escherichia coli, GI87081761, Length=67, Percent_Identity=76.1194029850746, Blast_Score=109, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007423 [H]

Pfam domain/function: PF04328 DUF466 [H]

EC number: NA

Molecular weight: Translated: 7802; Mature: 7802

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDTLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTYEEFFRERQQARYGGDG
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
KGGMRCC
CCCCCCC
>Mature Secondary Structure
MFDTLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTYEEFFRERQQARYGGDG
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
KGGMRCC
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]