Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 29144816

GI number: 29144816

Start: 4734842

End: 4736992

Strand: Reverse

Name: cstA [H]

Synonym: t4582

Alternate gene names: 29144816

Gene position: 4736992-4734842 (Counterclockwise)

Preceding gene: 29144817

Following gene: 29144815

Centisome position: 98.85

GC content: 57.42

Gene sequence:

>2151_bases
ATGGATACGAAAAAGATATTCAAGCACATACCCTGGGTGATTCTCGGAATCATCGGTGCTTTCTGCCTCTCGGTCGTTGC
CCTACGTCGGGGTGAACACGTGAGCGCCCTGTGGATCGTGGTCGCTTCCGTTTCCGTCTATCTGGTGGCTTACCGCTACT
ACAGCCTGTACATCGCCCAGAAGGTCATGAAACTCGACCCGACGCGCGCGACGCCGGCGGTTATCAATAACGACGGCCTG
AACTACGTGCCGACTAACCGCTACGTGCTGTTTGGTCACCACTTCGCCGCCATCGCCGGCGCAGGTCCGCTGGTCGGGCC
GGTATTGGCCGCGCAGATGGGCTATCTGCCGGGGACACTGTGGCTGCTGGCGGGCGTAGTGCTCGCGGGCGCAGTGCAGG
ACTTTATGGTGCTGTTCATCTCTTCCCGCCGTAACGGCGCCTCTCTTGGCGAGATGATCAAAGAAGAGATGGGGACCGTT
CCAGGCACCATCGCGCTATTCGGCTGCTTCTTAATCATGATCATCATCCTCGCGGTGCTGGCATTAATTGTGGTTAAAGC
GCTGGCCGAAAGCCCGTGGGGCGTCTTCACTGTCTGCTCAACGGTGCCGATTGCGCTGTTTATGGGCATCTACATGCGCT
TCCTGCGTCCGGGACGCGTAGGCGAAGTCTCCGTTATTGGTATCGTGCTGCTGGTGGCGTCTATTTACTTCGGCGGCGTA
ATTGCCCACGACCCGTACTGGGGCCCGGCGCTGACCTTTAAAGACACCACCATTACCTTCGCGCTGATCGGCTACGCCTT
TGTTTCCGCGCTGCTGCCGGTATGGCTGATCCTCGCCCCGCGCGACTATCTCGCTACCTTCCTGAAAATCGGCGTGATCG
TCGGTCTGGCGCTGGGGATTGTGATCCTCAACCCGGAACTGAAAATGCCAGCATTGACGCAGTATGTCGACGGTACCGGC
CCGCTGTGGAAAGGCGCTCTGTTCCCGTTCCTGTTCATCACCATCGCCTGTGGCGCCGTCTCTGGCTTCCACGCGCTCAT
CTCTTCCGGCACCACACCGAAACTGCTGGCCTGTGAGACCGATGCGCGTTTTATCGGCTACGGCGCGATGCTGATGGAGT
CCTTTGTTGCGGTGATGGCGCTGGTGGCGGCCTCGATCATTGAACCGGGTCTCTACTTCGCGATGAACACCCCGCCGGCA
GGTCTGGGCATTACCATGCCAAACCTGCACGAGATGGGCGGCGAGAACGCGCCGCTGATTATGGCGCAGTTGAAAGACGT
TACTGCACATGCAGCGGCGACCGTCAGCTCCTGGGGCTTTGTGATTTCCCCGGAACAAATCCTGCAAACTGCGAAAGATA
TCGGTGAACCGTCAGTATTGAACCGCGCAGGCGGCGCGCCAACGCTGGCAGTAGGTATCGCGCACGTGTTCCACAAAGTC
CTGCCGATGGCGGATATGGGCTTCTGGTATCACTTCGGTATTCTGTTCGAAGCACTGTTTATCCTGACCGCACTGGATGC
GGGTACCCGTTCCGGCCGCTTTATGTTGCAGGATTTGCTGGGTAACTTCGTCCCGTTCCTGAAAAAAACCGATTCTCTGG
TCGCGGGTATCATCGGTACCGCAGGCTGCGTCGGTTTGTGGGGCTATCTGCTGTATCAGGGTGTGGTCGACCCGCTGGGC
GGCGTGAAGAGCCTGTGGCCGCTCTTCGGTATCTCTAACCAGATGCTGGCCGCCGTGGCGCTGGTGTTGAGCACCGTGGT
ACTGATCAAAATGCAGCGCACCAAGTACATCTGGGTGACGGTAATCCCGGCGGTATGGCTGCTGATCTGCACCACCTGGG
CACTGGGCCTGAAACTGTTCAGCGCCAACCCACAGATGGAAGGTTTCTTCTACATGGCAAACCTGTATAAAGAGAAGATT
GCCAACGGCACCAACCTGACCGCGCAGCAGATTGCCAATATGAACCATATCGTGGTGAACAACTACACTAACGCTGGTTT
GAGTATTCTGTTCCTGGTGGTGGTGTACAGTATTATCTTCTACGGTTTCACCACCTGGATGAAGGTACGCAACAGCGATA
AACGTACCGATAAAGAAACCCCGTATGTGCCCGTGCCGGAAGGCGGCGTGAAGATCTCTTCACACCACTAA

Upstream 100 bases:

>100_bases
GCAAGATCCTCTCAGCATAGCAGTCAATCTACCTCCTCAAACACGAACTCAATGTCCACCCAGCTTCGGCTGATAATTAA
ACTTACAACCAGGTTTTACT

Downstream 100 bases:

>100_bases
AACTGATGCCGGGTAGCGCACAGCGATCCCGGCTAGTGTAGGCCGGATAAGGCGCAAGCCGCCATCCGGCTTTATTCATT
AACAGGACGGCAGAATGTTT

Product: carbon starvation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MDTKKIFKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGL
NYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGTV
PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGV
IAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGIVILNPELKMPALTQYVDGTG
PLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLACETDARFIGYGAMLMESFVAVMALVAASIIEPGLYFAMNTPPA
GLGITMPNLHEMGGENAPLIMAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKV
LPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLG
GVKSLWPLFGISNQMLAAVALVLSTVVLIKMQRTKYIWVTVIPAVWLLICTTWALGLKLFSANPQMEGFFYMANLYKEKI
ANGTNLTAQQIANMNHIVVNNYTNAGLSILFLVVVYSIIFYGFTTWMKVRNSDKRTDKETPYVPVPEGGVKISSHH

Sequences:

>Translated_716_residues
MDTKKIFKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGL
NYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGTV
PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGV
IAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGIVILNPELKMPALTQYVDGTG
PLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLACETDARFIGYGAMLMESFVAVMALVAASIIEPGLYFAMNTPPA
GLGITMPNLHEMGGENAPLIMAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKV
LPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLG
GVKSLWPLFGISNQMLAAVALVLSTVVLIKMQRTKYIWVTVIPAVWLLICTTWALGLKLFSANPQMEGFFYMANLYKEKI
ANGTNLTAQQIANMNHIVVNNYTNAGLSILFLVVVYSIIFYGFTTWMKVRNSDKRTDKETPYVPVPEGGVKISSHH
>Mature_716_residues
MDTKKIFKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGL
NYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGTV
PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGV
IAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGIVILNPELKMPALTQYVDGTG
PLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLACETDARFIGYGAMLMESFVAVMALVAASIIEPGLYFAMNTPPA
GLGITMPNLHEMGGENAPLIMAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKV
LPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLG
GVKSLWPLFGISNQMLAAVALVLSTVVLIKMQRTKYIWVTVIPAVWLLICTTWALGLKLFSANPQMEGFFYMANLYKEKI
ANGTNLTAQQIANMNHIVVNNYTNAGLSILFLVVVYSIIFYGFTTWMKVRNSDKRTDKETPYVPVPEGGVKISSHH

Specific function: Unknown

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI87082431, Length=716, Percent_Identity=96.6480446927374, Blast_Score=1406, Evalue=0.0,
Organism=Escherichia coli, GI1786814, Length=713, Percent_Identity=61.1500701262272, Blast_Score=861, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 77319; Mature: 77319

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKKIFKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTL
HHHHCCCCCCCCCEECCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCHHH
WLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGTVPGTIALFGCFLIMIIILAVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCE
IAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGI
EECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VILNPELKMPALTQYVDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLACET
EEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
DARFIGYGAMLMESFVAVMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGENAPLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCH
MAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKV
HHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHH
LPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDSLVAGIIGT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLSTVVLIKMQRTKYIWVT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEH
VIPAVWLLICTTWALGLKLFSANPQMEGFFYMANLYKEKIANGTNLTAQQIANMNHIVVN
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEE
NYTNAGLSILFLVVVYSIIFYGFTTWMKVRNSDKRTDKETPYVPVPEGGVKISSHH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCC
>Mature Secondary Structure
MDTKKIFKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTL
HHHHCCCCCCCCCEECCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCHHH
WLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGTVPGTIALFGCFLIMIIILAVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCE
IAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGI
EECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VILNPELKMPALTQYVDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLACET
EEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
DARFIGYGAMLMESFVAVMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGENAPLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCH
MAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKV
HHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHH
LPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDSLVAGIIGT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLSTVVLIKMQRTKYIWVT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEH
VIPAVWLLICTTWALGLKLFSANPQMEGFFYMANLYKEKIANGTNLTAQQIANMNHIVVN
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEE
NYTNAGLSILFLVVVYSIIFYGFTTWMKVRNSDKRTDKETPYVPVPEGGVKISSHH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]