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The map label for this gene is yhjE [H]

Identifier: 29144180

GI number: 29144180

Start: 4043690

End: 4045012

Strand: Reverse

Name: yhjE [H]

Synonym: t3908

Alternate gene names: 29144180

Gene position: 4045012-4043690 (Counterclockwise)

Preceding gene: 29144181

Following gene: 29144177

Centisome position: 84.41

GC content: 58.28

Gene sequence:

>1323_bases
ATGCAAGCAACCGCCACAACACTCGACCATGAGCAGGAACATGTTCCGGTAAACTCACGCAATAAAGTCGTTATTGCCTC
GCTTATCGGCACCGCGATTGAGTTCTTCGACTTCTATATTTACGCCACCGCAGCGGTGATCGTGTTCCCCCTTATCTTCT
TCCCCCAGGGCGATCCCACTGCGGCAACGCTACAATCGCTCGCCACCTTCGCTATCGCGTTTGTGGCGCGTCCGATCGGC
TCTGCGCTATTTGGTCACTTCGGCGACCGGGTAGGCCGCAAAGTCACGCTGGTGGCTTCGCTGCTGACGATGGGGATCTC
CACGGTCATTATCGGTCTGTTACCGGGCTACGCGACGATAGGTATTTTCGCGCCGCTGCTGCTGGCGCTGGCGCGTTTCG
GTCAGGGACTGGGGCTGGGCGGCGAATGGGGCGGCGCAGCGTTATTAGCGACGGAGAATGCGCCGCCGCGCAAACGCGCG
CTGTATGGCTCCTTCCCGCAGTTGGGCGCGCCGATCGGCTTCTTTTTTGCCAATGGCACCTTCCCGTTGCTCTCCTGGCT
ACTGACCGACGAGCAATTTATGAGCTGGGGCTGGCGCGTGCCGTTTATCTTCTCGGCGGTACTGGTGATTATCGGCCTGT
ATGTGCGCGTGTCGCTGCATGAAACGCCGGTGTTTGCGAAAGTCGCCGCAGCGAAAAAGCAGGTAAAAATACCGCTGGGC
ACGTTGCTGACGAAGCATGTCCACGTAACCATTCTCGGCACGTTTATCATGCTGGCGACCTACACGCTGTTCTATATCAT
GACCGTCTATTCCATGACTTACAGCACTGCCGCCGCGCCGGTGGGGCTTGGCTTGCCGCGCAATGAAATACTGTGGATGC
TGATGATGGCGGTGATTGGTTTCGGCGTGATGGTGCCCGTCGCCGGCCTGCTGGCGGACGCATTTGGCCGTCGGAAAAGC
ATGGTCATCATTACCACGCTCATCATTCTCTTCGCGTTGTTCGCCTTTACCCCGCTGCTGGGTTCAGGCAATCCAGCGCT
GGTATTCGTGTTCCTGTTGTTAGGTCTGAGCCTGATGGGGCTGACCTTCGGCCCAATGGGAGCGCTGCTGCCGGAGCTAT
TTCCGACGGAAGTACGCTATACCGGCGCATCGTTTTCCTACAATGTGTCATCGATTCTGGGCGCTTCCGTCGCGCCGTAT
ATTGCCGCATGGCTGCAAAGCCACTACGGGCTGGCGGCGGTAGGGGTTTACCTGGCGTCAATGGCGGCGCTGACGCTGAT
TGCACTGCTGTTAACCCATGAGACGCGTCATCAGGCGTTGTAA

Upstream 100 bases:

>100_bases
TTGCGCTTTTTTTGACCATTTTTGGCTTTTGTTACACATTGAAATATAACTTTTGCTGTGCGTAATATGGCTATTCGTTC
GCTAAAAATAAGAAAATAGT

Downstream 100 bases:

>100_bases
TAGGGCGCCGGATGGCGTCATCCGGCGCGACGTTTCACGTTACTGCTTCATCTGCGTTAAAATCGTCCGGCACTGATTGG
CTTCGCCCTCAGAGGGCGAA

Product: metabolite transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MQATATTLDHEQEHVPVNSRNKVVIASLIGTAIEFFDFYIYATAAVIVFPLIFFPQGDPTAATLQSLATFAIAFVARPIG
SALFGHFGDRVGRKVTLVASLLTMGISTVIIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
LYGSFPQLGAPIGFFFANGTFPLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHETPVFAKVAAAKKQVKIPLG
TLLTKHVHVTILGTFIMLATYTLFYIMTVYSMTYSTAAAPVGLGLPRNEILWMLMMAVIGFGVMVPVAGLLADAFGRRKS
MVIITTLIILFALFAFTPLLGSGNPALVFVFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPY
IAAWLQSHYGLAAVGVYLASMAALTLIALLLTHETRHQAL

Sequences:

>Translated_440_residues
MQATATTLDHEQEHVPVNSRNKVVIASLIGTAIEFFDFYIYATAAVIVFPLIFFPQGDPTAATLQSLATFAIAFVARPIG
SALFGHFGDRVGRKVTLVASLLTMGISTVIIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
LYGSFPQLGAPIGFFFANGTFPLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHETPVFAKVAAAKKQVKIPLG
TLLTKHVHVTILGTFIMLATYTLFYIMTVYSMTYSTAAAPVGLGLPRNEILWMLMMAVIGFGVMVPVAGLLADAFGRRKS
MVIITTLIILFALFAFTPLLGSGNPALVFVFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPY
IAAWLQSHYGLAAVGVYLASMAALTLIALLLTHETRHQAL
>Mature_440_residues
MQATATTLDHEQEHVPVNSRNKVVIASLIGTAIEFFDFYIYATAAVIVFPLIFFPQGDPTAATLQSLATFAIAFVARPIG
SALFGHFGDRVGRKVTLVASLLTMGISTVIIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
LYGSFPQLGAPIGFFFANGTFPLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHETPVFAKVAAAKKQVKIPLG
TLLTKHVHVTILGTFIMLATYTLFYIMTVYSMTYSTAAAPVGLGLPRNEILWMLMMAVIGFGVMVPVAGLLADAFGRRKS
MVIITTLIILFALFAFTPLLGSGNPALVFVFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPY
IAAWLQSHYGLAAVGVYLASMAALTLIALLLTHETRHQAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789941, Length=440, Percent_Identity=93.6363636363636, Blast_Score=744, Evalue=0.0,
Organism=Escherichia coli, GI1788292, Length=444, Percent_Identity=35.3603603603604, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI1790550, Length=430, Percent_Identity=33.7209302325581, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1788942, Length=434, Percent_Identity=31.1059907834101, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI87082404, Length=443, Percent_Identity=25.2821670428894, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082231, Length=469, Percent_Identity=26.0127931769723, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 47119; Mature: 47119

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00359 RIBOSOMAL_L11 ; PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATATTLDHEQEHVPVNSRNKVVIASLIGTAIEFFDFYIYATAAVIVFPLIFFPQGDPT
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AATLQSLATFAIAFVARPIGSALFGHFGDRVGRKVTLVASLLTMGISTVIIGLLPGYATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
GIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGT
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEECCCH
FPLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHETPVFAKVAAAKKQVKIPLG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCHH
TLLTKHVHVTILGTFIMLATYTLFYIMTVYSMTYSTAAAPVGLGLPRNEILWMLMMAVIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FGVMVPVAGLLADAFGRRKSMVIITTLIILFALFAFTPLLGSGNPALVFVFLLLGLSLMG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPYIAAWLQSHYGLAAVGVYLAS
HCCCCHHHHHHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MAALTLIALLLTHETRHQAL
HHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MQATATTLDHEQEHVPVNSRNKVVIASLIGTAIEFFDFYIYATAAVIVFPLIFFPQGDPT
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AATLQSLATFAIAFVARPIGSALFGHFGDRVGRKVTLVASLLTMGISTVIIGLLPGYATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
GIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGT
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEECCCH
FPLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHETPVFAKVAAAKKQVKIPLG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCHH
TLLTKHVHVTILGTFIMLATYTLFYIMTVYSMTYSTAAAPVGLGLPRNEILWMLMMAVIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FGVMVPVAGLLADAFGRRKSMVIITTLIILFALFAFTPLLGSGNPALVFVFLLLGLSLMG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPYIAAWLQSHYGLAAVGVYLAS
HCCCCHHHHHHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MAALTLIALLLTHETRHQAL
HHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]