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The map label for this gene is yfkN [H]

Identifier: 29143821

GI number: 29143821

Start: 3614224

End: 3615780

Strand: Reverse

Name: yfkN [H]

Synonym: t3515

Alternate gene names: 29143821

Gene position: 3615780-3614224 (Counterclockwise)

Preceding gene: 29143823

Following gene: 29143820

Centisome position: 75.46

GC content: 51.96

Gene sequence:

>1557_bases
ATGAAAGTAAAACTGCTTGCTGCCGGTATTTTGTTCACGCTGCCGTTCTGGGCCTGCGCCAAAGATGTCACCATTATTTA
CACCAACGATCTACACGCCCATGTGGAGCCTTATAAAGTACCGTGGATTGCTGACGGTAAACGCGATATTGGCGGTTGGG
CCAATATCACTACGCTGGTGAAGCAGGAAAAAGCCAAAAATAAGGCGACGTGGTTTTTTGATGCCGGAGATTACTTTACC
GGACCGTATATCAGCAGCCTGACGAAGGGTAAAGCGATTATCGATATTTTGAATACCATGCAGTATGACGCTGCCACTAT
CGGTAATCATGAGTTCGATCATGGCTGGGACAATACATTGTTGCAACTGAGCCGGGCGAAATTCCCTATCGTACAGGGCA
ATATTTTTTATGAGGACAGCAGTAAATCCTTCTGGGATAAGCCGTACACCATTGTTGAAAAAGATGGCGTCAAGATTGGC
GTAATCGGCTTACACGGTGTCTTTGCTTTTAATGATACGGTTTCTGCCGCGACGCGCGTGGGCATTGAGGCTCGCGATGA
AATTAAGTGGCTGCAACGTTACATTGATGAACTTAAAGGTAAAGTCGATCTGACCGTCGCGCTGATCCACGAAGGCACCC
CGGCCCGCCAGTCCAGCATGGGGAATACCGATGTGCGACGCGCGCTGGATAAAGATATTCAGACCGCAAGTCAGGTAAAA
GGGCTGGATATTTTGATTACCGGCCACGCGCATGTCGGTACGCCGGAACCGATTAAAGTCGGTAATACGCTGATCCTCTC
AACGGACAGCGGCGGTATTGATGTCGGCAAACTGGTGCTGGACTACCAGGAAAAGCCGCATCAGTTTACCGTGAAGAACT
TCGAGCTGAAGACCATTTTTGCTGATGAGTGGAAGCCCGATCCGCAAACGAAACAGGTGATCGACGGCTGGAACAAAAAG
CTCGATAAAGTCGTGCAGCAAACGGTGGCGCAGTCGCCGGTTGAGCTGACCCGCGCGTATGGCGAATCGTCGTCGCTGGG
GAATCTGGCGGCGGATGCGCTGCTTTTTACGGCGGGGAAAGACACCCAGTTAGCGCTTACTAACTCTGGCGGTATCCGCA
ACGAAATCCCGGCTGGTGCGGTGACGATGGGGGCGGTAATCAGTACCTTCCCGTTCCCTAATGAACTGGTCACGATGGAT
TTAACCGGTAAACAATTGCGCAGCCTGATGGAGCATGGCGCCGGATTAAGCAACGGCGTGTTGCAGGTGTCTAAAGGGCT
GGAGATGAAGTATGACAGCAGCAAACCTATCGGCCAGCGGGTTACCGTGCTGACGCTCAATGGCAAGCCGATTGATGATG
CGGCGGTTTATCACATCGCTACCAACAGCTTCCTTGCCGACGGCGGCGATGGTTTTGCGGCGTTCACGGAAGGCCAGGCA
CGGAACACCTCCGGCGGCTACTATGTGTCGAATGCGATAGTTGATTACTTTAAGGCGGGCAACACCATCACGGATGAGCA
GCTCAAAGGAATGCGTGTTGCGGATGTGAAGAAGTAA

Upstream 100 bases:

>100_bases
TGCCTTCATAAAACGGTACGCGGGTGTGAGGACTCTCACATAAAAAAACCTTTCAGAACGTAACGTAGCGAATCTTTATA
TGACTGAAAGGGACTTATTT

Downstream 100 bases:

>100_bases
GGGGTTACTTGCCTGTGCGCAATGGCCTTTAGCGCATTCAGGCCGGACGGCGGTATGTCTGGCCTGGATCATTCGTGGAC
CGCGGATATCAACCGTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; 5'-nucleotidase [H]

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MKVKLLAAGILFTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFT
GPYISSLTKGKAIIDILNTMQYDAATIGNHEFDHGWDNTLLQLSRAKFPIVQGNIFYEDSSKSFWDKPYTIVEKDGVKIG
VIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGTPARQSSMGNTDVRRALDKDIQTASQVK
GLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYQEKPHQFTVKNFELKTIFADEWKPDPQTKQVIDGWNKK
LDKVVQQTVAQSPVELTRAYGESSSLGNLAADALLFTAGKDTQLALTNSGGIRNEIPAGAVTMGAVISTFPFPNELVTMD
LTGKQLRSLMEHGAGLSNGVLQVSKGLEMKYDSSKPIGQRVTVLTLNGKPIDDAAVYHIATNSFLADGGDGFAAFTEGQA
RNTSGGYYVSNAIVDYFKAGNTITDEQLKGMRVADVKK

Sequences:

>Translated_518_residues
MKVKLLAAGILFTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFT
GPYISSLTKGKAIIDILNTMQYDAATIGNHEFDHGWDNTLLQLSRAKFPIVQGNIFYEDSSKSFWDKPYTIVEKDGVKIG
VIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGTPARQSSMGNTDVRRALDKDIQTASQVK
GLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYQEKPHQFTVKNFELKTIFADEWKPDPQTKQVIDGWNKK
LDKVVQQTVAQSPVELTRAYGESSSLGNLAADALLFTAGKDTQLALTNSGGIRNEIPAGAVTMGAVISTFPFPNELVTMD
LTGKQLRSLMEHGAGLSNGVLQVSKGLEMKYDSSKPIGQRVTVLTLNGKPIDDAAVYHIATNSFLADGGDGFAAFTEGQA
RNTSGGYYVSNAIVDYFKAGNTITDEQLKGMRVADVKK
>Mature_518_residues
MKVKLLAAGILFTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFT
GPYISSLTKGKAIIDILNTMQYDAATIGNHEFDHGWDNTLLQLSRAKFPIVQGNIFYEDSSKSFWDKPYTIVEKDGVKIG
VIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGTPARQSSMGNTDVRRALDKDIQTASQVK
GLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYQEKPHQFTVKNFELKTIFADEWKPDPQTKQVIDGWNKK
LDKVVQQTVAQSPVELTRAYGESSSLGNLAADALLFTAGKDTQLALTNSGGIRNEIPAGAVTMGAVISTFPFPNELVTMD
LTGKQLRSLMEHGAGLSNGVLQVSKGLEMKYDSSKPIGQRVTVLTLNGKPIDDAAVYHIATNSFLADGGDGFAAFTEGQA
RNTSGGYYVSNAIVDYFKAGNTITDEQLKGMRVADVKK

Specific function: Catalyzes the release of inorganic phosphate from 2',3'- cyclic nucleotides through consecutive 2',3'-phosphodiesterase and 3'- (or 2') nucleotidase activities. Also possesses a 5'- nucleotidase activity. Does not catalyze the release of inorganic phospha

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'-nucleotidase family [H]

Homologues:

Organism=Homo sapiens, GI4505467, Length=531, Percent_Identity=26.5536723163842, Blast_Score=126, Evalue=5e-29,
Organism=Escherichia coli, GI1786687, Length=505, Percent_Identity=23.7623762376238, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1790658, Length=257, Percent_Identity=25.6809338521401, Blast_Score=76, Evalue=7e-15,
Organism=Drosophila melanogaster, GI221329836, Length=540, Percent_Identity=26.2962962962963, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI19922446, Length=553, Percent_Identity=24.9547920433996, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24654424, Length=553, Percent_Identity=24.9547920433996, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24652512, Length=487, Percent_Identity=25.0513347022587, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19921980, Length=487, Percent_Identity=25.0513347022587, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI161076508, Length=487, Percent_Identity=25.0513347022587, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19922444, Length=562, Percent_Identity=25.0889679715303, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24641187, Length=514, Percent_Identity=26.0700389105058, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI28573524, Length=518, Percent_Identity=23.5521235521236, Blast_Score=124, Evalue=2e-28,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006146
- InterPro:   IPR006179
- InterPro:   IPR019931
- InterPro:   IPR004843
- InterPro:   IPR001899 [H]

Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]

EC number: =3.1.3.6; =3.1.4.16; =3.1.3.5 [H]

Molecular weight: Translated: 56538; Mature: 56538

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00786 5_NUCLEOTIDASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKLLAAGILFTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLV
CEEEEEEHHHHHHHHHHHHCCCEEEEEECCCEECCCCEECCEEECCCCCCCCHHHHHHHH
KQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDILNTMQYDAATIGNHEFDHGWDNTL
HHHHCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHCCCCCCCCCCCCHHH
LQLSRAKFPIVQGNIFYEDSSKSFWDKPYTIVEKDGVKIGVIGLHGVFAFNDTVSAATRV
HHHHHCCCCEEECEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCHHHHHHHC
GIEARDEIKWLQRYIDELKGKVDLTVALIHEGTPARQSSMGNTDVRRALDKDIQTASQVK
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCC
GLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYQEKPHQFTVKNFELKTIF
CEEEEEECCCCCCCCCCEECCCEEEEEECCCCCCHHHEEEECCCCCCEEEEEEEEEEEEE
ADEWKPDPQTKQVIDGWNKKLDKVVQQTVAQSPVELTRAYGESSSLGNLAADALLFTAGK
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCEEEEECCC
DTQLALTNSGGIRNEIPAGAVTMGAVISTFPFPNELVTMDLTGKQLRSLMEHGAGLSNGV
CCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCC
LQVSKGLEMKYDSSKPIGQRVTVLTLNGKPIDDAAVYHIATNSFLADGGDGFAAFTEGQA
EEECCCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEECCCCCEEEEECCCC
RNTSGGYYVSNAIVDYFKAGNTITDEQLKGMRVADVKK
CCCCCCEEEHHHHHHHHHCCCCCCHHHHCCCEECCCCC
>Mature Secondary Structure
MKVKLLAAGILFTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLV
CEEEEEEHHHHHHHHHHHHCCCEEEEEECCCEECCCCEECCEEECCCCCCCCHHHHHHHH
KQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDILNTMQYDAATIGNHEFDHGWDNTL
HHHHCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHCCCCCCCCCCCCHHH
LQLSRAKFPIVQGNIFYEDSSKSFWDKPYTIVEKDGVKIGVIGLHGVFAFNDTVSAATRV
HHHHHCCCCEEECEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCHHHHHHHC
GIEARDEIKWLQRYIDELKGKVDLTVALIHEGTPARQSSMGNTDVRRALDKDIQTASQVK
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCC
GLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYQEKPHQFTVKNFELKTIF
CEEEEEECCCCCCCCCCEECCCEEEEEECCCCCCHHHEEEECCCCCCEEEEEEEEEEEEE
ADEWKPDPQTKQVIDGWNKKLDKVVQQTVAQSPVELTRAYGESSSLGNLAADALLFTAGK
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCEEEEECCC
DTQLALTNSGGIRNEIPAGAVTMGAVISTFPFPNELVTMDLTGKQLRSLMEHGAGLSNGV
CCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCC
LQVSKGLEMKYDSSKPIGQRVTVLTLNGKPIDDAAVYHIATNSFLADGGDGFAAFTEGQA
EEECCCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEECCCCCEEEEECCCC
RNTSGGYYVSNAIVDYFKAGNTITDEQLKGMRVADVKK
CCCCCCEEEHHHHHHHHHCCCCCCHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]