| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is recN [H]
Identifier: 29143007
GI number: 29143007
Start: 2714398
End: 2716059
Strand: Direct
Name: recN [H]
Synonym: t2638
Alternate gene names: 29143007
Gene position: 2714398-2716059 (Clockwise)
Preceding gene: 29143006
Following gene: 29143008
Centisome position: 56.64
GC content: 54.63
Gene sequence:
>1662_bases ATGTTGGCGCAACTGACCATCAGCAATTTTGCTATCGTTCGTGAGCTTGAGATCGATTTTCAGAGCGGAATGACCGTCAT TACTGGTGAAACCGGCGCGGGTAAATCTATTGCGATTGATGCCCTGGGTCTGTGTCTGGGCGGTCGCGCTGAGGCCGATA TGGTCCGTACCGGAGCGACCCGCGCCGATTTGTGTGCCCGCTTTGCGCTGAAAGACACGCCTGCGGCATTGCGCTGGCTG GAAGAAAACCAGCTTGAAGAAGGTCGCGAATGCTTACTTCGCCGCGTTATCAGCAGCGATGGCCGCTCACGGGGCTTTAT TAACGGCACCGCTGTGCCCCTATCTCAATTGCGCGAGCTCGGTCAGTTGCTGATTCAAATTCATGGTCAACATACGCACC AGCAGCTGACCAAACCCGAACAGCAAAAATCGCTGCTGGATAGCTATGCCAACGAAGCCGCTTTAGCGCAGCAGATGGCT GCCCACTACCAATTATGGCATCAAAGCTGCCGCGATCTCGCCCATCACCAGCAACAAAGTCAGGAACGCGCCGCGCGCGC GGAACTGCTGCAATATCAGTTAAAAGAGTTGAACGACTTTAATCCGCAGGCCGGCGAATTCGAGCAAATTGACGAAGAGT ACAAACGGCTGGCCAACAGCGGGCAGTTGCTTACGACCAGCCAGAACGCTCTGGCGCTACTCGCGGACGGCGAAGACGTT AACCTGCAAAGCCAGTTATATAGCGCAAAACAACTGGTTAGCGAGCTGGTGGGTATGGACAGCAAGCTTTCCGGCATCCT GGATATGCTGGAAGAAGCCACTATCCAACTCACCGAAGCCAGCGATGAATTACGCCACTATTGCGAGCGTCTGGATTTAG ACCCCAATCGCCTGTTTGAGCTTGAACAGCGCATCGCTAAACAAATTTCGCTGGCGCGAAAACATCACGTCAGCCCGGAA GCGCTGCCGCAGCTTTATCAGTCACTGCTCGAAGAACAGCAGCAGCTCGACGATCAGGCCGATTCGCTGGAAACGCTGAC GCTGGCGGTTAATAAGCATCACCAACAAGCGCTGGAAACGGCGCAAGCGCTGCATCAACAGCGTCAGTTTTACGCCCAGG AGCTGGGGCAGTTGATCACTGAAAGTATGCATTTACTTTCGATGCCGCACGGTCTGTTTACTATCGACGTGAAATTTGAT GAGCATCATCTGAGCAACGACGGCGCCGATCGCGTGGAGTTTAAAGTGACGACAAACCCGGGTCAGCCGCTGCAGCCTAT CGCTAAAGTCGCGTCTGGCGGTGAACTGTCGCGCATTGCGCTGGCTATTCAGGTGATTACCGCGCGCAAAATGGAAACGC CGGCGCTAATTTTTGACGAGGTTGATGTTGGCATCAGCGGCCCAACCGCCGCCGTGGTCGGTAAACTCCTGCGTCAGCTT GGCGAATCCACTCAGGTGATGTGCGTCACTCACCTACCACAGGTAGCCGGGTGCGGTCACCAGCACTTCTTTGTCAGTAA AGAAACAGACGGGGCAATGACCGAAACCCATATGCAACCTTTGGATAAACGTGCGCGTTTACAGGAACTGGCCCGCCTGT TGGGAGGAAGTGAAGTTACGCGTAATACGCTGGCAAACGCAAAAGAACTGCTGGCGGCGTAA
Upstream 100 bases:
>100_bases AAAAAATTATTCTAATTTTACGTTAGCCTCTTTACTGTATAAAAAACCAGTTTATACTGTATTTAATTACAGTCATGGTT TTTCATACAGGAAAACAGCT
Downstream 100 bases:
>100_bases ACTTTTTTATCTCCCGAAGGTCTGAGTTCACAACAAAAACGCCGTAAGACCCGACAGCAAAAGGTTTTAAAGTGATGAAA GGTCTATTATCATCGGCATA
Product: recombination and repair protein
Products: NA
Alternate protein names: Recombination protein N [H]
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWL EENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLDSYANEAALAQQMA AHYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDV NLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPE ALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFD EHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
Sequences:
>Translated_553_residues MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWL EENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLDSYANEAALAQQMA AHYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDV NLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPE ALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFD EHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA >Mature_553_residues MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWL EENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLDSYANEAALAQQMA AHYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDV NLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPE ALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFD EHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
Specific function: May be involved in recombinational repair of damaged DNA [H]
COG id: COG0497
COG function: function code L; ATPase involved in DNA repair
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recN family [H]
Homologues:
Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=91.1392405063291, Blast_Score=1034, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004604 - InterPro: IPR003395 [H]
Pfam domain/function: PF02463 SMC_N [H]
EC number: NA
Molecular weight: Translated: 61321; Mature: 61321
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAT CCCEEEHHHHHHHHEEEEHHHCCCEEEECCCCCCCEEHHHHHHHHCCCCCCHHHHHCCCC RADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLREL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH GQLLIQIHGQHTHQQLTKPEQQKSLLDSYANEAALAQQMAAHYQLWHQSCRDLAHHQQQS HHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDV HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCC NLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFE CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCHHHHHH LEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALET HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCEEEEEEECCC GQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH GESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVT CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH RNTLANAKELLAA HHHHHHHHHHHCC >Mature Secondary Structure MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAT CCCEEEHHHHHHHHEEEEHHHCCCEEEECCCCCCCEEHHHHHHHHCCCCCCHHHHHCCCC RADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLREL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH GQLLIQIHGQHTHQQLTKPEQQKSLLDSYANEAALAQQMAAHYQLWHQSCRDLAHHQQQS HHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDV HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCC NLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFE CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCHHHHHH LEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALET HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCEEEEEEECCC GQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH GESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVT CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH RNTLANAKELLAA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037486; 9205837; 9278503 [H]