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The map label for this gene is smpA [H]

Identifier: 29143008

GI number: 29143008

Start: 2716208

End: 2716546

Strand: Direct

Name: smpA [H]

Synonym: t2639

Alternate gene names: 29143008

Gene position: 2716208-2716546 (Clockwise)

Preceding gene: 29143007

Following gene: 29143011

Centisome position: 56.68

GC content: 51.62

Gene sequence:

>339_bases
ATGCGCTGTAAAACGCTGACTGCTGCCGCAGCAGTACTCCTGATGTTGACCGCAGGCTGTTCCACTCTGGAGCGAGTGGT
TTACCGACCTGACATCAATCAGGGGAACTATCTTACACCTACGGATGTCGCCAAAGTGCGTGTTGGTATGACGCAACAAC
AGGTTGCGTATGCTTTAGGCACGCCGATGATGACCGATCCTTTTGGTACGAACACCTGGTTTTATGTCTTCCGCCAGCAG
CCAGGACATGAGAACGTGACGCAGCAGACTCTGACGCTCACCTTTAACAGCAGCGGCGTGTTAACCAATATTGATAACAA
ACCGGCGTTGACGAAGTAA

Upstream 100 bases:

>100_bases
ACCCGACAGCAAAAGGTTTTAAAGTGATGAAAGGTCTATTATCATCGGCATATTAATATGAGCCACGTACTGCTCAGGCC
CGAAAAGGAACCCAATCACT

Downstream 100 bases:

>100_bases
TTTTGTGATACCGCCTGATGAGGTTACGTTCATCAGGCCTGCAAACCTCTCCCCCGCCATTTGGTACGAATTTGCCTGAT
GGCGCTACGTTTATCTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQ
PGHENVTQQTLTLTFNSSGVLTNIDNKPALTK

Sequences:

>Translated_112_residues
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQ
PGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
>Mature_112_residues
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQ
PGHENVTQQTLTLTFNSSGVLTNIDNKPALTK

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=111, Percent_Identity=92.7927927927928, Blast_Score=219, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 12345; Mature: 12345

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALG
CCCCHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCEECCCCHHHEECCCCHHHHHHHHC
TPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALG
CCCCHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCEECCCCHHHEECCCCHHHHHHHHC
TPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]