| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is gloB [H]
Identifier: 29142978
GI number: 29142978
Start: 2680139
End: 2680894
Strand: Direct
Name: gloB [H]
Synonym: t2604
Alternate gene names: 29142978
Gene position: 2680139-2680894 (Clockwise)
Preceding gene: 29142976
Following gene: 29142979
Centisome position: 55.93
GC content: 43.78
Gene sequence:
>756_bases ATGAATCTTAACAGTATTCCCGCGTTTCAGGACAATTACATCTGGGTGCTGACCAATGATGAAGGCCGCTGTGTGATTGT TGATCCCGGCGAAGCGGCCCCCGTCTTAAAGGCCATTGCTGCACATAAGTGGATGCCGGAGGCGATTTTTCTGACGCATC ACCATTACGACCATGTTGGCGGAGTCAAAGAGCTGTTGCAACACTTCCCGCAAATGACGGTTTATGGACCGGCGGAAACG CAAGACAAGGGAGCAACCCATCTTGTTGGCGATGGCGATACTATTCGCGTTTTAGGCGAGAAATTTACTCTTTTTGCCAC GCCGGGCCACACGTTAGGACACGTCTGTTACTTTAGCCATCCTTACTTGTTCTGCGGCGACACGCTGTTCTCTGGCGGCT GTGGTAGATTGTTTGAAGGCACGCCATCACAGATGTATCAGTCACTTATGAAAATTAACTCTCTGCCTGACGACACACTC ATTTGCAGCGCTCACGAATACACTTTAGCTAACATTAAGTTCGCATTGAGCATACTTCCGCACGATTCGTTCATAAATGA ATATTATCGTAAAGTTAAAGAGTTACGTGTAAAAAAACAAATGACACTACCCGTTATTCTTAAAAATGAGCGTAAGATTA ATCTTTTTTTAAGAACTGAAGATATTGATTTAATTAATGAAATAAACAAAGAAACAATATTGCAACAACCAGAAGCGCGT TTTGCATGGTTAAGGTCAAAGAAAGACACGTTCTGA
Upstream 100 bases:
>100_bases GCCCCAGGGCAACTCACCCCAACATCCGGGCGCAACGACAGTTTGAGAGAGCCTTGCCGGTTTCATCGCAACCTTCCGCT AATTATTTGAGAGGTAATAT
Downstream 100 bases:
>100_bases TAATTCTTACTTGTCATTCGCTAACTTCGCCGTTATGATCGGTCGTCTTTTAAGCAACTATTGACACACACATGAAGGCA AAAGCGATATTACTCGCCTC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAAHKWMPEAIFLTHHHYDHVGGVKELLQHFPQMTVYGPAET QDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFSHPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTL ICSAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEAR FAWLRSKKDTF
Sequences:
>Translated_251_residues MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAAHKWMPEAIFLTHHHYDHVGGVKELLQHFPQMTVYGPAET QDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFSHPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTL ICSAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEAR FAWLRSKKDTF >Mature_251_residues MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAAHKWMPEAIFLTHHHYDHVGGVKELLQHFPQMTVYGPAET QDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFSHPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTL ICSAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEAR FAWLRSKKDTF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=260, Percent_Identity=32.6923076923077, Blast_Score=144, Evalue=8e-35, Organism=Homo sapiens, GI94538322, Length=260, Percent_Identity=32.6923076923077, Blast_Score=144, Evalue=9e-35, Organism=Homo sapiens, GI116642887, Length=227, Percent_Identity=35.2422907488987, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI21703352, Length=227, Percent_Identity=35.2422907488987, Blast_Score=128, Evalue=6e-30, Organism=Homo sapiens, GI14150041, Length=229, Percent_Identity=32.7510917030568, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI46361987, Length=194, Percent_Identity=33.5051546391753, Blast_Score=113, Evalue=2e-25, Organism=Escherichia coli, GI1786406, Length=251, Percent_Identity=78.0876494023904, Blast_Score=412, Evalue=1e-117, Organism=Escherichia coli, GI1787158, Length=192, Percent_Identity=29.6875, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17536925, Length=214, Percent_Identity=33.6448598130841, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17538952, Length=158, Percent_Identity=31.0126582278481, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320478, Length=232, Percent_Identity=30.6034482758621, Blast_Score=92, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6324614, Length=231, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24667711, Length=261, Percent_Identity=34.0996168582375, Blast_Score=157, Evalue=4e-39, Organism=Drosophila melanogaster, GI21356335, Length=261, Percent_Identity=34.0996168582375, Blast_Score=157, Evalue=5e-39, Organism=Drosophila melanogaster, GI24667703, Length=261, Percent_Identity=34.0996168582375, Blast_Score=157, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28566; Mature: 28566
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAAHKWMPEAIFLTHHHYDHVG CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHH GVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFSH HHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCEEEEEECEEEEEECCCCHHHEEEEECC PYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTLICSAHEYTLANIKFALSILP CEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEEEEECC HDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEAR CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCHHHHHHCCHHHHHCCCCHH FAWLRSKKDTF HHHHHCCCCCC >Mature Secondary Structure MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAAHKWMPEAIFLTHHHYDHVG CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHH GVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFSH HHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCEEEEEECEEEEEECCCCHHHEEEEECC PYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTLICSAHEYTLANIKFALSILP CEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEEEEECC HDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEAR CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCHHHHHHCCHHHHHCCCCHH FAWLRSKKDTF HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA