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The map label for this gene is ompW

Identifier: 29142080

GI number: 29142080

Start: 1703368

End: 1704006

Strand: Reverse

Name: ompW

Synonym: t1644

Alternate gene names: 29142080

Gene position: 1704006-1703368 (Counterclockwise)

Preceding gene: 29142085

Following gene: 29142070

Centisome position: 35.56

GC content: 53.36

Gene sequence:

>639_bases
ATGAAAAAATTTACAGTGGCGGCACTGGCGTTAACAACTCTTCTCTCAGGCAGCGCGTTCGCGCACGAAGCCGGAGAATT
CTTTATGCGTGCAGGTCCGGCAACCGTCAGACCTACAGAAGGGGCGGGTGGTACGCTGGGGCATTTAAACGGGTTTGATG
TGAGTAATAACACGCAACTCGGCCTGACATTCACTTACATGGCGACGGACAATATCGGGGTTGAATTGCTGGCGGCCACG
CCGTTCCGCCATAAGGTGGGTACGGGCGCGACGGGTGATATCGCCACGGTCCACCTGTTACCGCCAACGTTAATGGCGCA
GTGGTACTTCGGCGATTCCAGCAGCAAAGTGCGTCCTTATGTCGGCGTGGGGGTGAACTACACCACCTTCTTCGATAACG
ACTTTAACGATAATGGTAAAAAGACCGGGCTGTCCGATCTGAGCTTTAAGGATTCCTGGGGCGCGGCAGGGCAAGTTGGG
GTAGATTACCTGATTAACCGCGACTGGTTAATTGGCGCCTCTGTCTGGTACATGGATATTGATACTACAGCCAATTATAA
AATGGGCGGCGTGCAGCAGCATGACAGCGTGCGTCTGGACCCATGGGTATTTATGTTCTCGGCAGGCTATCGTTTCTAA

Upstream 100 bases:

>100_bases
ATGTTAAATTATAAGAACAAATGTGATCTGTGTTAGATCACTTATTACTTCATTGTGGGTATATTCATCACGCTTTTATA
ACCATAACGATGGAGCGGGT

Downstream 100 bases:

>100_bases
TCGCGTGATGTTGTGACGAAAAAAGACCCCGCCAGGCGGGGTCAAAAAAGGACATGACACACGGATTTTACTTGTCGGAA
CTCACTTGTCTTCTTTCGGT

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAGYRF

Sequences:

>Translated_212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAGYRF
>Mature_212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=88.6792452830189, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMPW_SALTI (Q8Z7E2)

Other databases:

- EMBL:   AL627269
- EMBL:   AE014613
- RefSeq:   NP_455766.1
- RefSeq:   NP_805422.1
- ProteinModelPortal:   Q8Z7E2
- SMR:   Q8Z7E2
- GeneID:   1071256
- GeneID:   1247719
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t1644
- KEGG:   sty:STY1319
- HOGENOM:   HBG701154
- OMA:   MAQYYFG
- ProtClustDB:   PRK10959
- BioCyc:   SENT209261:T1644-MONOMER
- BioCyc:   SENT220341:STY1319-MONOMER
- InterPro:   IPR011250
- InterPro:   IPR005618
- Gene3D:   G3DSA:2.40.160.20

Pfam domain/function: PF03922 OmpW

EC number: NA

Molecular weight: Translated: 22993; Mature: 22993

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEE
GLTFTYMATDNIGVELLAATPFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPY
EEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHEEEEEECCCCCCCCEE
VGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQVGVDYLINRDWLIGASVWYMDI
EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKMGGVQQHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC
>Mature Secondary Structure
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEE
GLTFTYMATDNIGVELLAATPFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPY
EEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHEEEEEECCCCCCCCEE
VGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQVGVDYLINRDWLIGASVWYMDI
EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKMGGVQQHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504