Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 29142070

GI number: 29142070

Start: 1692883

End: 1693764

Strand: Reverse

Name: trpH [H]

Synonym: t1634

Alternate gene names: 29142070

Gene position: 1693764-1692883 (Counterclockwise)

Preceding gene: 29142080

Following gene: 29142069

Centisome position: 35.35

GC content: 56.12

Gene sequence:

>882_bases
ATGGGAGCCGCCTTGAGCGACACGAATTACGCAGTGATTTACGATCTGCACAGTCATACCACGGCGTCCGATGGACTGTT
GACGCCAGAAACATTAGTACACCGTGCGGTAGAGATGCGAGTCGGCACGCTGGCGATTACCGATCATGACACCACAGCTG
CGATTCCTGCGGCAAGAGAAGAAATTTCACGTTGCGGGCTGGCCCTGAATCTGATTCCCGGCGTGGAGATTTCAACGGTC
TGGGAGAATCATGAGATTCACATTGTGGGTCTGAATATTGATATTGCGCACCCGGCAATGCGCGATTTTCTAGCGCAGCA
GACACATCGGCGTCAGGCGCGTGGTCGGCTCATTGCGGAGCGTCTGGAAAAAGCCCATATTCCCGGCGCGTGGGAAGGGG
CATTGAGACTGGCCAATGGCGGCGCGGTGACGCGCGGCCACTTCGCCCGCTTTCTGGTGGAGTGCGGCAAAGCCACGACC
ATGGCGGAGGTTTTTAAAAAATATCTCGCGCGTGGGAAAACCGGTTACGTTCCGCCGCAGTGGTGTACAATAGAACAAGC
TATTGATGTCATTCATCATTCTGGCGGTAAGGCGGTGTTGGCCCACCCGGGACGCTACGACCTTAGCGCTAAGTGGCTGA
AAAGATTAGTGGCGCATTTTGCCGACCATCACGGCGACGCGATGGAAGTGGCGCAGTGCCAACAATCACCCAATGAACGC
ACCCAACTGGCGACGCTTGCGCGTCAGCATCATTTATGGGCATCGCTTGGATCTGATTTCCATCAGCCCTGCCCGTGGAT
TGAGTTGGGGCGTAAACTCTGGCTGCCCGCTGGCGTTGAAGGCGTATGGCAGGCATGGGAACAGCCGCAAATATCACAGT
GA

Upstream 100 bases:

>100_bases
AACTTTCGTACTAGTTAACTGGTTCAATGGAATAATGTCAACACCTATTTCAGTATATTTGCCGGAACCGTTATGATGTA
CATGACATACCTTTATCTCT

Downstream 100 bases:

>100_bases
GGGAAGTATGAGCCAGTTTTTTTATATCCATCCGGATAACCCACAGCAACGGCTGATTAATCAGGCCGTCGACATTGTGC
GTAAAGGCGGTGTTATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRCGLALNLIPGVEISTV
WENHEIHIVGLNIDIAHPAMRDFLAQQTHRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKATT
MAEVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQAWEQPQISQ

Sequences:

>Translated_293_residues
MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRCGLALNLIPGVEISTV
WENHEIHIVGLNIDIAHPAMRDFLAQQTHRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKATT
MAEVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQAWEQPQISQ
>Mature_292_residues
GAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRCGLALNLIPGVEISTVW
ENHEIHIVGLNIDIAHPAMRDFLAQQTHRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKATTM
AEVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNERT
QLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQAWEQPQISQ

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=286, Percent_Identity=90.5594405594406, Blast_Score=535, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 32434; Mature: 32303

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAARE
CCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCHHCHHHHH
EISRCGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAMRDFLAQQTHRRQARGRLIAE
HHHHCCEEEEECCCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKATTMAEVFKKYLARGKTGYVPPQ
HHHHHCCCCCCHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
WCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQAWEQPQISQ
HHHHHHHHHHHHHHHHCCHHCCCCCHHHHCHHHCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAARE
CCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCHHCHHHHH
EISRCGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAMRDFLAQQTHRRQARGRLIAE
HHHHCCEEEEECCCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKATTMAEVFKKYLARGKTGYVPPQ
HHHHHCCCCCCHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
WCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQAWEQPQISQ
HHHHHHHHHHHHHHHHCCHHCCCCCHHHHCHHHCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]