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The map label for this gene is ydeJ [H]

Identifier: 29141886

GI number: 29141886

Start: 1480653

End: 1481180

Strand: Reverse

Name: ydeJ [H]

Synonym: t1435

Alternate gene names: 29141886

Gene position: 1481180-1480653 (Counterclockwise)

Preceding gene: 29141888

Following gene: 29141883

Centisome position: 30.91

GC content: 49.05

Gene sequence:

>528_bases
ATGAGATTAGAACAGCACGATATTGTCACCCTTGATGAAGCCGAATCCGTCGATAGCCTGACAAAAAAACTTGGTGATTT
ACTGGTTAACCAGAAACTCCGTCTGACCAGTGCAGAATCCTGCCCTGGCGGGAAACTGGCGTCAGCATTGTGCGCAGCAG
AAGATACGCCCTCATTTTACGGTGTGGGGTATGTCACCTTTACTGATGAAGCCAAAGCAAAAATCTTACGCGTACAACGC
CACAGTCTTGCCGAACATACCGCCGTCAGCGAAGCGGTTGTTACTGAAATGGCACAGGGCGCTAAGGATCAGGCTGAGGT
CAATATCAGCATAGCGATCAGCGGCTATGGCGGTCCGGAAGGCGGCGAAGATGGCACGCCGGCGGGCACAGTTTGGTTTG
CCTGGAATATTAACAATACAACTTTTACAAGCCGACAACATTTCAACGGAGATTGTCAGGAAGTATTGGAAAAATGCGTA
CGCTTCGCCCTCGCTGAATTGCTTTTTCTGTTAACGAAGAAAGCATAA

Upstream 100 bases:

>100_bases
TGGATAAAATAATCATTCACTGACAATGTCATAAAATAAATATGCCATACTTGAGAAGAACGAACAGATTTCATTTGTCT
CTGTAACGGAAAAATAAACG

Downstream 100 bases:

>100_bases
ACAATAATTTCATCTGACCGGTCAGAATAACTCCCGGTCAGAATAAAAAAATGCGAGCCTATGGCCCGCATCGTATGTGC
AATATTTCAGAATATATTTA

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRLEQHDIVTLDEAESVDSLTKKLGDLLVNQKLRLTSAESCPGGKLASALCAAEDTPSFYGVGYVTFTDEAKAKILRVQR
HSLAEHTAVSEAVVTEMAQGAKDQAEVNISIAISGYGGPEGGEDGTPAGTVWFAWNINNTTFTSRQHFNGDCQEVLEKCV
RFALAELLFLLTKKA

Sequences:

>Translated_175_residues
MRLEQHDIVTLDEAESVDSLTKKLGDLLVNQKLRLTSAESCPGGKLASALCAAEDTPSFYGVGYVTFTDEAKAKILRVQR
HSLAEHTAVSEAVVTEMAQGAKDQAEVNISIAISGYGGPEGGEDGTPAGTVWFAWNINNTTFTSRQHFNGDCQEVLEKCV
RFALAELLFLLTKKA
>Mature_175_residues
MRLEQHDIVTLDEAESVDSLTKKLGDLLVNQKLRLTSAESCPGGKLASALCAAEDTPSFYGVGYVTFTDEAKAKILRVQR
HSLAEHTAVSEAVVTEMAQGAKDQAEVNISIAISGYGGPEGGEDGTPAGTVWFAWNINNTTFTSRQHFNGDCQEVLEKCV
RFALAELLFLLTKKA

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1787818, Length=162, Percent_Identity=59.2592592592593, Blast_Score=207, Evalue=4e-55,
Organism=Escherichia coli, GI1789052, Length=149, Percent_Identity=38.255033557047, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 18893; Mature: 18893

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEQHDIVTLDEAESVDSLTKKLGDLLVNQKLRLTSAESCPGGKLASALCAAEDTPSFY
CCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCEE
GVGYVTFTDEAKAKILRVQRHSLAEHTAVSEAVVTEMAQGAKDQAEVNISIAISGYGGPE
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCC
GGEDGTPAGTVWFAWNINNTTFTSRQHFNGDCQEVLEKCVRFALAELLFLLTKKA
CCCCCCCCCEEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLEQHDIVTLDEAESVDSLTKKLGDLLVNQKLRLTSAESCPGGKLASALCAAEDTPSFY
CCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCEE
GVGYVTFTDEAKAKILRVQRHSLAEHTAVSEAVVTEMAQGAKDQAEVNISIAISGYGGPE
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCC
GGEDGTPAGTVWFAWNINNTTFTSRQHFNGDCQEVLEKCVRFALAELLFLLTKKA
CCCCCCCCCEEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]