| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29141808
Identifier: 29141808
GI number: 29141808
Start: 1413653
End: 1414000
Strand: Reverse
Name: 29141808
Synonym: t1354
Alternate gene names: NA
Gene position: 1414000-1413653 (Counterclockwise)
Preceding gene: 29141809
Following gene: 29141807
Centisome position: 29.51
GC content: 61.21
Gene sequence:
>348_bases ATGAAAACGACCTCAGTATTCTGGCAACCAGCTCTGCAGGCTCCCGGCGAAATCGTCCGGGGGCTGGATGATATCCGGCA GTCCATCCAGATCATCCTGCGGACTCCCCGCGGCAGCGACCCGCATCGCCCGGAGTTCGGCAGCAATCTGCACCTTTATA TCGACTGGCCTGTCGGCCGGGCCATTCCGCATGTGGTTCGCGAATCCGTCGATGCCATCAGGCGCTGGGAACCCCGCTGC CAGCTTATGTCGGTTAAACCCGCCGTCGACGGCGAACATCTTACGCTCCGGGTGAGCTGGAAAGGCTCAGACGGACAACC CCGTACTCAGGAACTGCTATGGCGCTGA
Upstream 100 bases:
>100_bases ACATATTTGCTGATGGTCAGAACTCTAATCACCATTCCCATTGAACCTTCTTAAACGCCTTTAATATCGGCGCTTACTTC CCGGGGGCAATACTGCCTCC
Downstream 100 bases:
>100_bases CAGAACCCGATTTTATTGAACGCGATGCCGATAAAATCACGGCAGAAATGATTGCGAAGTATGAAGCGGATACCGGAAAA ACGCTGTACCCGGCACAGGC
Product: bacteriophage baseplate protein
Products: NA
Alternate protein names: Bacteriophage Baseplate Protein; GPW/Gp25 Family Protein; Bacteriophage Baseplate Assembly Protein W; Prophage; Phage Baseplate Assembly Protein; Phage Baseplate-Like Protein; Phage Baseplate Protein GpW
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKTTSVFWQPALQAPGEIVRGLDDIRQSIQIILRTPRGSDPHRPEFGSNLHLYIDWPVGRAIPHVVRESVDAIRRWEPRC QLMSVKPAVDGEHLTLRVSWKGSDGQPRTQELLWR
Sequences:
>Translated_115_residues MKTTSVFWQPALQAPGEIVRGLDDIRQSIQIILRTPRGSDPHRPEFGSNLHLYIDWPVGRAIPHVVRESVDAIRRWEPRC QLMSVKPAVDGEHLTLRVSWKGSDGQPRTQELLWR >Mature_115_residues MKTTSVFWQPALQAPGEIVRGLDDIRQSIQIILRTPRGSDPHRPEFGSNLHLYIDWPVGRAIPHVVRESVDAIRRWEPRC QLMSVKPAVDGEHLTLRVSWKGSDGQPRTQELLWR
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13241; Mature: 13241
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTSVFWQPALQAPGEIVRGLDDIRQSIQIILRTPRGSDPHRPEFGSNLHLYIDWPVGR CCCCCCEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCH AIPHVVRESVDAIRRWEPRCQLMSVKPAVDGEHLTLRVSWKGSDGQPRTQELLWR HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHCCC >Mature Secondary Structure MKTTSVFWQPALQAPGEIVRGLDDIRQSIQIILRTPRGSDPHRPEFGSNLHLYIDWPVGR CCCCCCEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCH AIPHVVRESVDAIRRWEPRCQLMSVKPAVDGEHLTLRVSWKGSDGQPRTQELLWR HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA