| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29141809
Identifier: 29141809
GI number: 29141809
Start: 1414057
End: 1414584
Strand: Reverse
Name: 29141809
Synonym: t1355
Alternate gene names: NA
Gene position: 1414584-1414057 (Counterclockwise)
Preceding gene: 29141810
Following gene: 29141808
Centisome position: 29.52
GC content: 54.36
Gene sequence:
>528_bases ATGACTGGTGTCACCCGTCAGATCGGTACGGTCAGTGCCGTTGATGCCGACAGGGTTCAGGCCCGCGTTCGTCTGCCTGA ATGCGATAATCTGCGCACAAACTGGCTTAACGTGCTACAGCGCAATACCCAGGATAACAAGGATTACTGGCTCCCTGACG TGGGGGAGCAGGTTGAGGTGCTGCTCGATGCCAACGGCGAGGATGGTGTTATTCTGGGCGCGGTGTACTCAGACGTCGAT AAACCGCCGTTCAGTGATAAAAACGTCCGGGGTACGAAATACGCTGATGGCGCGGAGTTCAGTTATAACCGCGCGACCCA TACGCTGACGGTCAGAGGAGGTATTGAGCGTATCGTGGTGGAGGTTGCCGCTGATATCTCTCTCAAAGGGAAAAACCTCG ACCTCACGGGAGTTACCACGATCAACGGCCCCGCGACACTCAATGGTGATCTGGAAATCAACGGAAGCGCCCATGCAACG GGTAACATATTTGCTGATGGTCAGAACTCTAATCACCATTCCCATTGA
Upstream 100 bases:
>100_bases CACGGGGGCCAGTCACAAGAGGGAAAAAACAAAAAACTCAGAAACTCACGGTTTATCACCCGGATGGCAGTACATCGACG GTGATTAAGGAGAAGAAAAA
Downstream 100 bases:
>100_bases ACCTTCTTAAACGCCTTTAATATCGGCGCTTACTTCCCGGGGGCAATACTGCCTCCATGAAAACGACCTCAGTATTCTGG CAACCAGCTCTGCAGGCTCC
Product: bacteriophage baseplate protein
Products: NA
Alternate protein names: Phage Baseplate Component; Phage Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Baseplate Assembly Protein V; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein GpV; Prophage; Phage Baseplate Protein; Bacteriophage Baseplate Assembly; Phage Tail Spike Protein
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTGVTRQIGTVSAVDADRVQARVRLPECDNLRTNWLNVLQRNTQDNKDYWLPDVGEQVEVLLDANGEDGVILGAVYSDVD KPPFSDKNVRGTKYADGAEFSYNRATHTLTVRGGIERIVVEVAADISLKGKNLDLTGVTTINGPATLNGDLEINGSAHAT GNIFADGQNSNHHSH
Sequences:
>Translated_175_residues MTGVTRQIGTVSAVDADRVQARVRLPECDNLRTNWLNVLQRNTQDNKDYWLPDVGEQVEVLLDANGEDGVILGAVYSDVD KPPFSDKNVRGTKYADGAEFSYNRATHTLTVRGGIERIVVEVAADISLKGKNLDLTGVTTINGPATLNGDLEINGSAHAT GNIFADGQNSNHHSH >Mature_174_residues TGVTRQIGTVSAVDADRVQARVRLPECDNLRTNWLNVLQRNTQDNKDYWLPDVGEQVEVLLDANGEDGVILGAVYSDVDK PPFSDKNVRGTKYADGAEFSYNRATHTLTVRGGIERIVVEVAADISLKGKNLDLTGVTTINGPATLNGDLEINGSAHATG NIFADGQNSNHHSH
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18927; Mature: 18796
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVTRQIGTVSAVDADRVQARVRLPECDNLRTNWLNVLQRNTQDNKDYWLPDVGEQVEV CCCCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEE LLDANGEDGVILGAVYSDVDKPPFSDKNVRGTKYADGAEFSYNRATHTLTVRGGIERIVV EEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCHHHEEE EVAADISLKGKNLDLTGVTTINGPATLNGDLEINGSAHATGNIFADGQNSNHHSH EHHCCEEECCCCEEEEEEEEECCCEEECCCEEECCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure TGVTRQIGTVSAVDADRVQARVRLPECDNLRTNWLNVLQRNTQDNKDYWLPDVGEQVEV CCCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEE LLDANGEDGVILGAVYSDVDKPPFSDKNVRGTKYADGAEFSYNRATHTLTVRGGIERIVV EEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCHHHEEE EVAADISLKGKNLDLTGVTTINGPATLNGDLEINGSAHATGNIFADGQNSNHHSH EHHCCEEECCCCEEEEEEEEECCCEEECCCEEECCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA