| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is nfdA [H]
Identifier: 29141797
GI number: 29141797
Start: 1401809
End: 1403515
Strand: Reverse
Name: nfdA [H]
Synonym: t1340
Alternate gene names: 29141797
Gene position: 1403515-1401809 (Counterclockwise)
Preceding gene: 29141798
Following gene: 29141796
Centisome position: 29.29
GC content: 57.23
Gene sequence:
>1707_bases ATGCTAATGATCAGTCTCGTCCCGCCTCTGCTTTCCAGAACCGCGCTTCTCTTTCTGCTCACGGCCACAGGCGCAGCCAC CGCCGCCCGCCCGGCAGCGGATATTATTTTGCATAACGGTAATATCATCACTCTGAATGATGCCCAGCCGCAGGCCAGCG CGCTGGCGATTTCCGGCTCGCGGATTGTGGCGATTGGCGATGATACGGCGACAAATGAATGGCGCGGCGACCATACCCGT ACCATCGATTTACAGGGTAAAACCGTGATACCCGGCCTGACCGATACCCATATTCACGCCATTCGCGGCGGACAAACCTG GACATTCGAAACCTACTGGTACGACAGCCCTTCGCTTAAAGACGCGCTGGATAAATTACGCGCCGACGCTAACCGTCGTC CCCACGATCAATGGGTAGCCGTAGTGGGATCATGGATACCGGCGCAATTTGCAGAAAACCGGGCGTCGACGGTAGCCGAA CTGAGCCACGCCCTTCCCGATCATCCGGCTTATATTCAGTATCTTTACGACTATGCGTTAGTGAATCAGCGCGGTATAGA CGTACTTGGCCTTAACGACACCCCTCCTCCTGATTTAGCGGGAATCCGCGTAGAGCGCGACGCAAAAGGTAGCGCCACGG GGAAATTATTTGGTGACATCGCCGCGTTTAACCAGCTTTTTGCCAGCATAAGTAGTAACGCCGATCGCGAGGGCGGTCTG CGACAATTTTTCGCTGATATGAACGCTCGCGGCGTGACCGGCATCATTGACCCCTCTGCCGGGCCTGCCGCCGCTTATGA GCCTTTATTTGCAATGCGAAACCAGGGGGATTTACCGCTGCGCGTGGGGTATCGCATTCCGGTACAGCCGGAAGCGAAAG GTCATGAAGCGCAGTGGTTCAGCAACCTGATGGCCTTTCGCCCGGCGCGTGCCGACGACGGGCAACTGGCTTTTCTTGGC CTGGGGGAAAGCCTGGTGGCAGGAATGAATGACGGCGTGCGGATGGCCCCAGGGTTTTCTTCCTCAGAGCAGGACAAAAC CGCGCTTCGCCAGGTCGCGACGTTTGCGGCAAAACGGGGAATACCGCTTGAGATCCACGCCTATACCGATGACAGCGCCG ACGCGATATTGACGATTTTTGAGCAGGTAGCGCAGCAGTACGATCTGCGCCCTCTCCGCTGGTCTATTGCGCATCTGAAT ACCGGTTCGCCACAGACACTTGAGCGAATGCGTAAGCTGGGTCTGGCATACACTGTGCAAATGGGGCCTTACTTTGAGGG GCTTGCCATCCGTGACGCCAACCCACCCGGTGCGACGGACAATTCGCCGCCGGTTCGACTGGCGCTGGATAAAGGGCTTG TCGTAGCTGGCGGCACCGATTCGACGCGTATTGGCATTGCCGGTGTCTGGCACGCTATCGAATATCATATCACCGGTATA GCGTCAGGCGGTTCCGTGCGTAAACCCGCCAGCGAGCGGCTCACGCGTCTGGAAGCGCTAGCGTTATATACACGTCATGC CGCCTGGCTCGCCTTTGCCGAACAACACCGGGGCCAGCTTAGCGTCGGAAAACAGGCCGATCTGGCGGTGCTCAATCAGC CCTTTATGACGATGCCGGAAGACAGAATTGATACCATTCGCGCTGTTTTGACGCTTGTCGATGGACGCATTGTTCACGAA AGTCCGGACCTTAACGCCGGACAATGA
Upstream 100 bases:
>100_bases ATCACCACCGTTCTAAAAACAGAACGCACTGTTCCCTGGGCACAGATTGAACAATTCTTGTTCGCTCTCTATGGTTTGCT TATCTCCCGACAAAAGGAAC
Downstream 100 bases:
>100_bases GGTTGTCAGTTGACGCAAAGCCTGCTTTTATAACCCACCAGCGGCGCTGACGGGAAATCTTTTCCGTCAGCGCGCGATAG AGCTAATGTATTGAGATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGSRIVAIGDDTATNEWRGDHTR TIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLKDALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAE LSHALPDHPAYIQYLYDYALVNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWFSNLMAFRPARADDGQLAFLG LGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRGIPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLN TGSPQTLERMRKLGLAYTVQMGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPEDRIDTIRAVLTLVDGRIVHE SPDLNAGQ
Sequences:
>Translated_568_residues MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGSRIVAIGDDTATNEWRGDHTR TIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLKDALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAE LSHALPDHPAYIQYLYDYALVNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWFSNLMAFRPARADDGQLAFLG LGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRGIPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLN TGSPQTLERMRKLGLAYTVQMGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPEDRIDTIRAVLTLVDGRIVHE SPDLNAGQ >Mature_568_residues MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGSRIVAIGDDTATNEWRGDHTR TIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLKDALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAE LSHALPDHPAYIQYLYDYALVNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWFSNLMAFRPARADDGQLAFLG LGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRGIPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLN TGSPQTLERMRKLGLAYTVQMGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPEDRIDTIRAVLTLVDGRIVHE SPDLNAGQ
Specific function: Hydrolyzes N-substituted formamides, but not amides. N- benzylformamide is the preferred substrate, while N-butylformamide is hydrolyzed at a much lower rate. Has very low activity towards allylformamide, N-(2-cyclohex-1-enylethyl)formamide and N-(alpha-
COG id: COG1574
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: =3.5.1.91 [H]
Molecular weight: Translated: 61439; Mature: 61439
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGS CEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEECCC RIVAIGDDTATNEWRGDHTRTIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLK EEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEEEEECCCCHH DALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAELSHALPDHPAYIQYLYDYAL HHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL HCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWF HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEECEECCCCCCCCCCHHHHH SNLMAFRPARADDGQLAFLGLGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRG HHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC IPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLNTGSPQTLERMRKLGLAYTVQ CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE MGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEEHHHHHHEEEEEEEEE ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPE ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCH DRIDTIRAVLTLVDGRIVHESPDLNAGQ HHHHHHHHHHHHHCCEEEECCCCCCCCC >Mature Secondary Structure MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGS CEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEECCC RIVAIGDDTATNEWRGDHTRTIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLK EEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEEEEECCCCHH DALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAELSHALPDHPAYIQYLYDYAL HHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL HCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWF HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEECEECCCCCCCCCCHHHHH SNLMAFRPARADDGQLAFLGLGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRG HHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC IPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLNTGSPQTLERMRKLGLAYTVQ CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE MGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEEHHHHHHEEEEEEEEE ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPE ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCH DRIDTIRAVLTLVDGRIVHESPDLNAGQ HHHHHHHHHHHHHCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA