| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is leuO [H]
Identifier: 29140660
GI number: 29140660
Start: 135975
End: 136919
Strand: Direct
Name: leuO [H]
Synonym: t0119
Alternate gene names: 29140660
Gene position: 135975-136919 (Clockwise)
Preceding gene: 29140650
Following gene: 29140661
Centisome position: 2.84
GC content: 48.36
Gene sequence:
>945_bases ATGCCAGAGGTCAAAACCGAAAAGCCGCATCTTTTAGATATGGGCAAACCACAGCTTCGCATGGTTGATTTGAACCTATT GACCGTGTTCGATGCGGTAATGCAAGAGCAGAATATTACGCGCGCCGCCCACACGCTGGGAATGTCGCAGCCTGCGGTCA GTAACGCCGTAGCGCGTCTGAAGGTTATGTTTAATGACGAACTTTTTGTTCGATATGGACGAGGAATTCAGCCGACTGCC CGTGCATTTCAGTTATTTGGTTCAGTCCGTCAGGCGTTGCAATTGGTGCAAAATGAATTGCCGGGATCGGGGTTTGAGCC GACCAGCAGCGAACGTGTATTCAATCTTTGCGTGTGCAGTCCGCTGGATAATATCCTGACGTCACAGATTTATAATCGTG TAGAAAAAATTGCGCCAAATATTCATGTCGTTTTTAAAGCGTCGTTGAATCAGAATACTGAGCATCAGTTACGCTATCAG GAAACCGAGTTCGTTATTAGTTATGAAGAATTCCGTCGTCCTGAGTTTACCAGCGTACCGCTATTTAAAGATGAAATGGT TTTAGTCGCCAGCCGAAAACACCCGCGTATTAGCGGCCCGCTACTGGAAGGCGATGTTTATAATGAACAACATGCGGTTG TTTCTCTCGATCGTTATGCGTCATTTAGTCGGCCGTGGTATGACACGCCGGATAAACAGTCGAGCGTGGCTTATCAGGGC ATGGCGCTTATCAGCGTTCTGAACGTGGTTTCGCAGACGCATTTGGTCGCTATTGCCCCGCGCTGGCTGGCGGAAGAGTT TGCGGAGTCGCTGGAGCTGCAAATACTGCCGTTGCCTTTAAAACTGAATAGCCGGACATGCTACCTTTCCTGGCATGAAG CGGCTGGGCGTGATAAAGGGCATCAATGGATGGAAGATTTATTAGTCTCTGTTTGTAAGCGATAA
Upstream 100 bases:
>100_bases TCCCTTTTTCTTATTTTATATGCATGGTAAATCATATTTTCAGGAATTATTTCTGCCTTCAGCCAGAAAAAGGGAGTTAA GCGTGACAGTGGAGTTAAAT
Downstream 100 bases:
>100_bases AACCGGGCAGAATAAATCAGAAACAAATTCTGGTTTATTCTGCTTTTTAGCGTATGTCAAAAATTTTATGCTGAATTAAC GGTGAGCGATTCTTTTCGTC
Product: leucine transcriptional activator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPEVKTEKPHLLDMGKPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTA RAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEKIAPNIHVVFKASLNQNTEHQLRYQ ETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPRISGPLLEGDVYNEQHAVVSLDRYASFSRPWYDTPDKQSSVAYQG MALISVLNVVSQTHLVAIAPRWLAEEFAESLELQILPLPLKLNSRTCYLSWHEAAGRDKGHQWMEDLLVSVCKR
Sequences:
>Translated_314_residues MPEVKTEKPHLLDMGKPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTA RAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEKIAPNIHVVFKASLNQNTEHQLRYQ ETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPRISGPLLEGDVYNEQHAVVSLDRYASFSRPWYDTPDKQSSVAYQG MALISVLNVVSQTHLVAIAPRWLAEEFAESLELQILPLPLKLNSRTCYLSWHEAAGRDKGHQWMEDLLVSVCKR >Mature_313_residues PEVKTEKPHLLDMGKPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTAR AFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEKIAPNIHVVFKASLNQNTEHQLRYQE TEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPRISGPLLEGDVYNEQHAVVSLDRYASFSRPWYDTPDKQSSVAYQGM ALISVLNVVSQTHLVAIAPRWLAEEFAESLELQILPLPLKLNSRTCYLSWHEAAGRDKGHQWMEDLLVSVCKR
Specific function: Unknown
COG id: COG0583
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87081684, Length=314, Percent_Identity=87.2611464968153, Blast_Score=584, Evalue=1e-168, Organism=Escherichia coli, GI87081766, Length=289, Percent_Identity=28.3737024221453, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1786820, Length=289, Percent_Identity=23.8754325259516, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 35758; Mature: 35627
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVKTEKPHLLDMGKPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARL CCCCCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHE KVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCS EEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC PLDNILTSQIYNRVEKIAPNIHVVFKASLNQNTEHQLRYQETEFVISYEEFRRPEFTSVP CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHEEECHHEEEEHHHHCCCCCCCCC LFKDEMVLVASRKHPRISGPLLEGDVYNEQHAVVSLDRYASFSRPWYDTPDKQSSVAYQG CCCCCEEEEECCCCCCCCCCEECCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHH MALISVLNVVSQTHLVAIAPRWLAEEFAESLELQILPLPLKLNSRTCYLSWHEAAGRDKG HHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCEEEEEEEEEECCCEEEEEEHHHCCCCCH HQWMEDLLVSVCKR HHHHHHHHHHHHCC >Mature Secondary Structure PEVKTEKPHLLDMGKPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARL CCCCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHE KVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCS EEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC PLDNILTSQIYNRVEKIAPNIHVVFKASLNQNTEHQLRYQETEFVISYEEFRRPEFTSVP CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHEEECHHEEEEHHHHCCCCCCCCC LFKDEMVLVASRKHPRISGPLLEGDVYNEQHAVVSLDRYASFSRPWYDTPDKQSSVAYQG CCCCCEEEEECCCCCCCCCCEECCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHH MALISVLNVVSQTHLVAIAPRWLAEEFAESLELQILPLPLKLNSRTCYLSWHEAAGRDKG HHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCEEEEEEEEEECCCEEEEEEHHHCCCCCH HQWMEDLLVSVCKR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609; 3519576 [H]