Click here to switch to the map view.

The map label for this gene is bcfG [H]

Identifier: 29140570

GI number: 29140570

Start: 30509

End: 31213

Strand: Direct

Name: bcfG [H]

Synonym: t0028

Alternate gene names: 29140570

Gene position: 30509-31213 (Clockwise)

Preceding gene: 29140569

Following gene: 29140571

Centisome position: 0.64

GC content: 54.18

Gene sequence:

>705_bases
ATGAATAAGTTCTTTTTACACTGCGCGATATATTGGTGCTTGCTTCCCATATCATGGGCGCAGGCTGGCGTGGTAATTGG
CGGTACTCGCTTTATCTATCATGCGGGCGCCCCGGCATTAAGCGTACCGGTAAGTAACCATTCAGAAGCGTCCTGGTTAA
TTGATACGCATATTTTACCTGGTGGCCGCTGGCCTGGAACCAAAAACGAAGGGAATATTACGCCCTTCGTGGTCACGCCG
CCATTATTTATGCTTTCAGCGCGCCAGGAAAACTCAATGCGGGTGGTTTATACCGGCGGACCGCTACCCGCCGACAGGGA
AAGTCTGTTTACCTTGAGTATCGCCGCTATTCCCTCCGGTAAACCGGAAGCGAACCGTGTACAAATGGCGTTTCGTTCGG
CTTTAAAATTGCTCTATCGCCCTGAGGGACTCGCCGGCAATCCGCAGCAGGCCTACCGGCATCTGATCTGGTCGCTTACC
CCCGATGGCGCGACGGTACGCAATCCGACACCCTATTACGTTACGCTCTTTTTATTACGCGCTAACGAGCGCGCCCAGGA
CAACGCCGGGGTCGTGGCTCCCTTTGCAACGCGTCAAACGGACTGGTGCCGGCACGCGGTTCGCTGCACTGTGCGCTGGC
AAAGTATTAATGACTATGGGCGGGTAATGACAGCGCAAACCGTGGATCTGACGCGTATTCATTAA

Upstream 100 bases:

>100_bases
CAGGCGTCGGCGCATCTGCAATTTTACGCGCGTTATCTTGCCGATGGCGGCACGGTAACGCCCGGGGACGCCAATGCCTC
CGCAACCTTCATTCTTGCCT

Downstream 100 bases:

>100_bases
CCTATTTTTCAGGCGTCTCCCGATAGCGGGAGGCTTTCCGATCTTATCGAACGAGACTTTTATTATGTATTATCACGCGT
TAAAACTTTCCCGACTGGCG

Product: fimbrial chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNKFFLHCAIYWCLLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRWPGTKNEGNITPFVVTP
PLFMLSARQENSMRVVYTGGPLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLT
PDGATVRNPTPYYVTLFLLRANERAQDNAGVVAPFATRQTDWCRHAVRCTVRWQSINDYGRVMTAQTVDLTRIH

Sequences:

>Translated_234_residues
MNKFFLHCAIYWCLLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRWPGTKNEGNITPFVVTP
PLFMLSARQENSMRVVYTGGPLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLT
PDGATVRNPTPYYVTLFLLRANERAQDNAGVVAPFATRQTDWCRHAVRCTVRWQSINDYGRVMTAQTVDLTRIH
>Mature_234_residues
MNKFFLHCAIYWCLLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRWPGTKNEGNITPFVVTP
PLFMLSARQENSMRVVYTGGPLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLT
PDGATVRNPTPYYVTLFLLRANERAQDNAGVVAPFATRQTDWCRHAVRCTVRWQSINDYGRVMTAQTVDLTRIH

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI87081806, Length=230, Percent_Identity=41.7391304347826, Blast_Score=170, Evalue=8e-44,
Organism=Escherichia coli, GI1787171, Length=223, Percent_Identity=33.1838565022422, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790771, Length=221, Percent_Identity=35.2941176470588, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786743, Length=233, Percent_Identity=33.9055793991416, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1786333, Length=226, Percent_Identity=33.1858407079646, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789532, Length=215, Percent_Identity=31.1627906976744, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788428, Length=204, Percent_Identity=28.4313725490196, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788677, Length=214, Percent_Identity=28.5046728971963, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1786936, Length=204, Percent_Identity=28.921568627451, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 26059; Mature: 26059

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFFLHCAIYWCLLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILP
CCEEEHHHHHHHHHHHHHHHHCCEEEECEEEEEECCCCEEEEECCCCCCCEEEEEEEECC
GGRWPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTGGPLPADRESLFTLSIAAIPSG
CCCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCC
KPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYVTLFLLR
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEE
ANERAQDNAGVVAPFATRQTDWCRHAVRCTVRWQSINDYGRVMTAQTVDLTRIH
CCCCCCCCCCEEEECCCCCHHHHHHHEEEEEEEECCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MNKFFLHCAIYWCLLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILP
CCEEEHHHHHHHHHHHHHHHHCCEEEECEEEEEECCCCEEEEECCCCCCCEEEEEEEECC
GGRWPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTGGPLPADRESLFTLSIAAIPSG
CCCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCC
KPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYVTLFLLR
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEE
ANERAQDNAGVVAPFATRQTDWCRHAVRCTVRWQSINDYGRVMTAQTVDLTRIH
CCCCCCCCCCEEEECCCCCHHHHHHHEEEEEEEECCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2992959; 7984428 [H]