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The map label for this gene is bcfF [H]

Identifier: 29140569

GI number: 29140569

Start: 29998

End: 30516

Strand: Direct

Name: bcfF [H]

Synonym: t0027

Alternate gene names: 29140569

Gene position: 29998-30516 (Clockwise)

Preceding gene: 29140568

Following gene: 29140570

Centisome position: 0.63

GC content: 55.88

Gene sequence:

>519_bases
ATGCGTAACGATATCCTGTACGGCATCGGGATGCTGCTGGCGGCATCCGGCGTCCAGGCGCACGATGGCCGGGTCTATGT
CTCCGGAACCATCACGGACAATACGTGTTCGCTCTCTCCAGGCTCGGAAAATATTAACGTGGCGATGGGCGCGGTTTCTC
AACGGCAGTTTTATCGCGCGGGCGACGGTTCCGCCTGGCAACCTTTTGCTATCGATTTACAGAACTGCGGTAGCACTGCC
AGCGGCGTAACGGTCAGTTTTAGCGGTGCAGGGGATAGCCGTAATACGGATTTATTGGCGCTTACCGCAGGGGAAAGCGA
CGCTTCAGGAATTGGGATTGCGCTTTATGATCAAAATAAAACTTTAATCCCACTGGGGCAGGAGAGTGATGTGGTGACGC
TCAGTCCGGGCCAGGCGTCGGCGCATCTGCAATTTTACGCGCGTTATCTTGCCGATGGCGGCACGGTAACGCCCGGGGAC
GCCAATGCCTCCGCAACCTTCATTCTTGCCTATGAATAA

Upstream 100 bases:

>100_bases
TTATATTCGCTATAAATCGACCCGGCCGACGGTCACGTCCGGGAACGCGACGGCGGTCATGTATTTCGATATGCAGTATG
AATGAGGAGCCATCGTAATT

Downstream 100 bases:

>100_bases
GTTCTTTTTACACTGCGCGATATATTGGTGCTTGCTTCCCATATCATGGGCGCAGGCTGGCGTGGTAATTGGCGGTACTC
GCTTTATCTATCATGCGGGC

Product: fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRNDILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTA
SGVTVSFSGAGDSRNTDLLALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGTVTPGD
ANASATFILAYE

Sequences:

>Translated_172_residues
MRNDILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTA
SGVTVSFSGAGDSRNTDLLALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGTVTPGD
ANASATFILAYE
>Mature_172_residues
MRNDILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTA
SGVTVSFSGAGDSRNTDLLALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGTVTPGD
ANASATFILAYE

Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of fimH in the fimbriae [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1790773, Length=177, Percent_Identity=38.9830508474576, Blast_Score=110, Evalue=4e-26,
Organism=Escherichia coli, GI87081805, Length=168, Percent_Identity=39.8809523809524, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI87082421, Length=152, Percent_Identity=36.8421052631579, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI1787781, Length=173, Percent_Identity=33.5260115606936, Blast_Score=86, Evalue=9e-19,
Organism=Escherichia coli, GI1789422, Length=179, Percent_Identity=30.1675977653631, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87081753, Length=155, Percent_Identity=33.5483870967742, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17721; Mature: 17721

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNDILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRA
CCCCEEEHHHHHHHCCCCEECCCEEEEEEEEECCEEECCCCCCCEEEEEECCCCCEEEEC
GDGSAWQPFAIDLQNCGSTASGVTVSFSGAGDSRNTDLLALTAGESDASGIGIALYDQNK
CCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCC
TLIPLGQESDVVTLSPGQASAHLQFYARYLADGGTVTPGDANASATFILAYE
EEEEECCCCCEEEECCCCCCHHHHEEEHHHCCCCEECCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRNDILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRA
CCCCEEEHHHHHHHCCCCEECCCEEEEEEEEECCEEECCCCCCCEEEEEECCCCCEEEEC
GDGSAWQPFAIDLQNCGSTASGVTVSFSGAGDSRNTDLLALTAGESDASGIGIALYDQNK
CCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCC
TLIPLGQESDVVTLSPGQASAHLQFYARYLADGGTVTPGDANASATFILAYE
EEEEECCCCCEEEECCCCCCHHHHEEEHHHCCCCEECCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890081; 7610040; 9278503; 1970114 [H]