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The map label for this gene is bcfD [H]

Identifier: 29140567

GI number: 29140567

Start: 28429

End: 29436

Strand: Direct

Name: bcfD [H]

Synonym: t0025

Alternate gene names: 29140567

Gene position: 28429-29436 (Clockwise)

Preceding gene: 29140566

Following gene: 29140568

Centisome position: 0.59

GC content: 50.4

Gene sequence:

>1008_bases
ATGAAAATACCTCTTTTATTTGCTCTGCTGGCGGGGAGTGTCGTATCGCAGTACGCACACGCAGACGTGTGTAAAAACGT
TAACGGCGTGCCTTCCAGTATTAATTACGATTTAACGACCACTCTGACGGCAGAACAAAACCAGGTGGGAAAGACGGTTC
AACTGGAAAAAAGCCAGGAAGTTAATGTACAGGCGGTGTGTCCCGCCGGCGCGTCGACCTATAGCCAGACTTATCGCTCC
TATGTGTCGCCATATCCGGTCGTAGAAACGAGCGGTAACTGGAAATATTTAAAGCTGGGCCCGGACTACCTTGAAGGCGG
AATGCGAATTGAGGATTCTTCGGCGGGCGATATCTATCCGCCAATGAACAATGTCCTGATGGGATATGATGAAAATGTGA
AAGCGGGTCAACCGTTTTACGTTCGTGACTCAAATCTGGAGTTTCAGCTCAAAATTGTTAAACCGTTCGTCGGCACGGTG
AATATTAGTCCTAAGACTATGTTCAATGTTTATGTCATGACCGCCGCAGGCGATCCGCTGACAGATGTCGTGTACAGCAT
TCTTTATAGTGGAACGGTGACCGTACCGCAAAGCTGCGAAATCAACGCCGGACAAACGATTCTGGTGAATTTCGGTGCAT
TATACAGCGGCAATTTCAACCATGCAGGCCAAAAGCCGGAGGGGGTACGAGCGAAAAAATTCAGCGTACCGGTAAAGTGC
AGCGGTCTGGATTCGCAGGTCAATTTAACGATGCGTCTTATCGCTACGCCGGATAGCCACTTTCCCCAGGCTATCGCTTC
GGATAATGCCGATGTCGGTGTAGTGGTCGAAACCGATGAAGGAAACGCGCTTATTCCCAATGATGTACAGAGCGTCGCGC
CTTTTATCACCGATAGCGCCGGACGCGCTAACATCACATTGCAAGCCTACCCGGTGAGTACAACAGGTGAAACGCCAGCG
GAAGGGGCGTTTACCGCCCTGGCCAGCCTGCGAGTGGACTTTGACTAA

Upstream 100 bases:

>100_bases
CGTTCGCTGGGGGAACCTGCCGGATCAACAGTGCGTCGCGTCCTATCATCTCTCTTCCTCCCGTCAGATTCTGAGTCGAC
AATATGCGGAGTGTCATTAA

Downstream 100 bases:

>100_bases
ATGAACAGATCACACTGCGCTCTTTTTGTCATGGGACTAATCCTGTGTCCACAAATCAATGCCAGCGCTGACGACCTCGC
TTATAACCTCGAATTTACCG

Product: fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKIPLLFALLAGSVVSQYAHADVCKNVNGVPSSINYDLTTTLTAEQNQVGKTVQLEKSQEVNVQAVCPAGASTYSQTYRS
YVSPYPVVETSGNWKYLKLGPDYLEGGMRIEDSSAGDIYPPMNNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTV
NISPKTMFNVYVMTAAGDPLTDVVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGNFNHAGQKPEGVRAKKFSVPVKC
SGLDSQVNLTMRLIATPDSHFPQAIASDNADVGVVVETDEGNALIPNDVQSVAPFITDSAGRANITLQAYPVSTTGETPA
EGAFTALASLRVDFD

Sequences:

>Translated_335_residues
MKIPLLFALLAGSVVSQYAHADVCKNVNGVPSSINYDLTTTLTAEQNQVGKTVQLEKSQEVNVQAVCPAGASTYSQTYRS
YVSPYPVVETSGNWKYLKLGPDYLEGGMRIEDSSAGDIYPPMNNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTV
NISPKTMFNVYVMTAAGDPLTDVVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGNFNHAGQKPEGVRAKKFSVPVKC
SGLDSQVNLTMRLIATPDSHFPQAIASDNADVGVVVETDEGNALIPNDVQSVAPFITDSAGRANITLQAYPVSTTGETPA
EGAFTALASLRVDFD
>Mature_335_residues
MKIPLLFALLAGSVVSQYAHADVCKNVNGVPSSINYDLTTTLTAEQNQVGKTVQLEKSQEVNVQAVCPAGASTYSQTYRS
YVSPYPVVETSGNWKYLKLGPDYLEGGMRIEDSSAGDIYPPMNNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTV
NISPKTMFNVYVMTAAGDPLTDVVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGNFNHAGQKPEGVRAKKFSVPVKC
SGLDSQVNLTMRLIATPDSHFPQAIASDNADVGVVVETDEGNALIPNDVQSVAPFITDSAGRANITLQAYPVSTTGETPA
EGAFTALASLRVDFD

Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Seems to be a mannose-binding adhesin [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693100, Length=328, Percent_Identity=43.5975609756098, Blast_Score=254, Evalue=6e-69,
Organism=Escherichia coli, GI1787173, Length=337, Percent_Identity=31.4540059347181, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1789534, Length=207, Percent_Identity=30.9178743961353, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35909; Mature: 35909

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPLLFALLAGSVVSQYAHADVCKNVNGVPSSINYDLTTTLTAEQNQVGKTVQLEKSQE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCC
VNVQAVCPAGASTYSQTYRSYVSPYPVVETSGNWKYLKLGPDYLEGGMRIEDSSAGDIYP
CCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEECHHHHCCCCEEECCCCCCCCC
PMNNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTVNISPKTMFNVYVMTAAGDPL
CCCCEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEEECCCCEEEEEEEEEECCCCH
TDVVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGNFNHAGQKPEGVRAKKFSVPVKC
HHHHHHHHHCCEEECCCCCCCCCCCEEEEEECEEECCCCCCCCCCCCCCCEEEEECCEEE
SGLDSQVNLTMRLIATPDSHFPQAIASDNADVGVVVETDEGNALIPNDVQSVAPFITDSA
CCCCCCEEEEEEEEECCCCCCCHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHCCCC
GRANITLQAYPVSTTGETPAEGAFTALASLRVDFD
CCEEEEEEEEECCCCCCCCCCHHHEEEEEEEEECC
>Mature Secondary Structure
MKIPLLFALLAGSVVSQYAHADVCKNVNGVPSSINYDLTTTLTAEQNQVGKTVQLEKSQE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCC
VNVQAVCPAGASTYSQTYRSYVSPYPVVETSGNWKYLKLGPDYLEGGMRIEDSSAGDIYP
CCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEECHHHHCCCCEEECCCCCCCCC
PMNNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTVNISPKTMFNVYVMTAAGDPL
CCCCEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEEECCCCEEEEEEEEEECCCCH
TDVVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGNFNHAGQKPEGVRAKKFSVPVKC
HHHHHHHHHCCEEECCCCCCCCCCCEEEEEECEEECCCCCCCCCCCCCCCEEEEECCEEE
SGLDSQVNLTMRLIATPDSHFPQAIASDNADVGVVVETDEGNALIPNDVQSVAPFITDSA
CCCCCCEEEEEEEEECCCCCCCHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHCCCC
GRANITLQAYPVSTTGETPAEGAFTALASLRVDFD
CCEEEEEEEEECCCCCCCCCCHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]