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The map label for this gene is yaaA [H]

Identifier: 29140548

GI number: 29140548

Start: 5114

End: 5887

Strand: Reverse

Name: yaaA [H]

Synonym: t0005

Alternate gene names: 29140548

Gene position: 5887-5114 (Counterclockwise)

Preceding gene: 29140549

Following gene: NA

Centisome position: 0.12

GC content: 50.39

Gene sequence:

>774_bases
ATGCTGATTCTGATTTCACCTGCAAAAACGCTTGATTATCAAAGCCCGCTGGCCACGACCCGCTATACCCAGCCGGAGCT
GTTGGATCACAGCCAGCAGCTTATTCAACAGGCCCGCCAGCTTTCGGCGCCGCAAATTTCCAGGCTAATGGGAATTAGCG
ACAAACTGGCGGATCTCAACGCCACGCGTTTTCATGACTGGCAGCCTCATTTTACGCCGGATAATGCACGCCAGGCGATT
CTGGCGTTCAAAGGCGATGTTTATACCGGCCTACAGGCGGAAACGTTCAACGACGCGGATTTTGATTTTGCTCAACAACA
TCTGCGTATGCTCTCTGGCTTGTATGGCGTATTGCGCCCGCTGGATTTAATGCAGCCTTATCGTCTGGAGATGGGGATTC
GCCTGGAGAATCCGCGCGGCAAAGATCTTTATCAATTCTGGGGCGATATCATTACCGATAAGCTCAACGAAGCGCTTGAG
GCGCAGGGCGATCGGGTGGTGGTGAATCTGGCCTCCGAGGAATATTTTAAATCGGTGAAGCCGAAGAAACTGGATGCCGA
ACTGATTAAGCCCGTATTCCTTGATGAGAAAAACGGCAAGTTTAAGGTGGTAAGCTTCTACGCCAAAAAAGCGCGCGGAC
TGATGAGTCGTTTTATTATTGAAAACCGCTTAACGAAGCCGGAACAGCTTACCGCGTTTGACCGTGAAGGGTATTTCTTT
GATGAAGAAACCTCCACACAAGACGAGCTGGTCTTTAAACGCTACGAGCAGTAA

Upstream 100 bases:

>100_bases
GGATGCGGCATCGCGCGATTAAGCCGACAATCGCAACCATCGGTCAACTCTGCGGCGTTTTTTTGCTAAAGTCGCAGAAA
ATTCCCTGCAAGGACTGGAT

Downstream 100 bases:

>100_bases
CGACATCGCCGGATGGCGGTTACGCCTTATCCGGCCTACAAATCGGCACCACCCCATAGGCCCGGTAAGCGACAGCGCCA
CCGGGCGCAATGGTTACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLNATRFHDWQPHFTPDNARQAI
LAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALE
AQGDRVVVNLASEEYFKSVKPKKLDAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
DEETSTQDELVFKRYEQ

Sequences:

>Translated_257_residues
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLNATRFHDWQPHFTPDNARQAI
LAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALE
AQGDRVVVNLASEEYFKSVKPKKLDAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
DEETSTQDELVFKRYEQ
>Mature_257_residues
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLNATRFHDWQPHFTPDNARQAI
LAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALE
AQGDRVVVNLASEEYFKSVKPKKLDAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
DEETSTQDELVFKRYEQ

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=85.9922178988327, Blast_Score=461, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 29765; Mature: 29765

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLN
CEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCC
ATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRP
CCCCCCCCCCCCCCHHHHEEHEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALEAQGDRVVVNLASEEYFKSVK
HHHCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCC
PKKLDAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
CCCCCHHHHCHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCEE
DEETSTQDELVFKRYEQ
CCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLN
CEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCC
ATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRP
CCCCCCCCCCCCCCHHHHEEHEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALEAQGDRVVVNLASEEYFKSVK
HHHCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCC
PKKLDAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
CCCCCHHHHCHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCEE
DEETSTQDELVFKRYEQ
CCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA