| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379677
Identifier: 28379677
GI number: 28379677
Start: 2955899
End: 2956327
Strand: Direct
Name: 28379677
Synonym: lp_3322
Alternate gene names: NA
Gene position: 2955899-2956327 (Clockwise)
Preceding gene: 28379675
Following gene: 28379680
Centisome position: 89.35
GC content: 45.45
Gene sequence:
>429_bases ATGCCAAAATTTGATATCACCCTCATCAGTCCCGAACGCGCTAAAGCGATGTTGACTGAATATAAAGAACAACGTAAGAA CTCTGTCCCACATCTGGCCCATCCTGGCCGCTATATCTTGCCGGATTACAAATTAACTCGTCGCCGGGCCGCATTCAAAA TTGTTAAACATACCTTTTTAACGCCCCACTACAAGTCTTACGTTGCCATGGACTCTGACAACGGCCACACACTCTGGTTT CATAATTTCGGTTCCCTAACCGAAGCTTTATTCTGGTTAGAAACCGGCCTTAAAATCAGCGATACCGACTCCCATTCTAA CTACAAGGAATGGATGGCTAAGCACACTACGGAAATCGAAACCTTCAAAGACTTGCTGCGCGAGCAGAAGCATAAACAAG GGCCCAAGACTAAGAAAAAAGCCAAGTAG
Upstream 100 bases:
>100_bases ATTTCGAATTTTCATAAAATTGCGCTATCATTATAGTATAAGTATTATTATTTGACTACTATAATTAACCATACTGCTAT TCACCAAGGGGAGCCCTGCT
Downstream 100 bases:
>100_bases CCCGTTTTGACACCTAGATTCAGATAAGCAGCAGTACGCTCATTAGCGTGCTGCTGCTTTTATTTACGATCAACTGTGCC ATTCATTACTGACTAGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPKFDITLISPERAKAMLTEYKEQRKNSVPHLAHPGRYILPDYKLTRRRAAFKIVKHTFLTPHYKSYVAMDSDNGHTLWF HNFGSLTEALFWLETGLKISDTDSHSNYKEWMAKHTTEIETFKDLLREQKHKQGPKTKKKAK
Sequences:
>Translated_142_residues MPKFDITLISPERAKAMLTEYKEQRKNSVPHLAHPGRYILPDYKLTRRRAAFKIVKHTFLTPHYKSYVAMDSDNGHTLWF HNFGSLTEALFWLETGLKISDTDSHSNYKEWMAKHTTEIETFKDLLREQKHKQGPKTKKKAK >Mature_141_residues PKFDITLISPERAKAMLTEYKEQRKNSVPHLAHPGRYILPDYKLTRRRAAFKIVKHTFLTPHYKSYVAMDSDNGHTLWFH NFGSLTEALFWLETGLKISDTDSHSNYKEWMAKHTTEIETFKDLLREQKHKQGPKTKKKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16745; Mature: 16614
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKFDITLISPERAKAMLTEYKEQRKNSVPHLAHPGRYILPDYKLTRRRAAFKIVKHTFL CCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHC TPHYKSYVAMDSDNGHTLWFHNFGSLTEALFWLETGLKISDTDSHSNYKEWMAKHTTEIE CCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCHHH TFKDLLREQKHKQGPKTKKKAK HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PKFDITLISPERAKAMLTEYKEQRKNSVPHLAHPGRYILPDYKLTRRRAAFKIVKHTFL CCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHC TPHYKSYVAMDSDNGHTLWFHNFGSLTEALFWLETGLKISDTDSHSNYKEWMAKHTTEIE CCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCHHH TFKDLLREQKHKQGPKTKKKAK HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA