Click here to switch to the map view.

The map label for this gene is 28379675

Identifier: 28379675

GI number: 28379675

Start: 2954862

End: 2955386

Strand: Direct

Name: 28379675

Synonym: lp_3319

Alternate gene names: NA

Gene position: 2954862-2955386 (Clockwise)

Preceding gene: 28379674

Following gene: 28379677

Centisome position: 89.32

GC content: 48.19

Gene sequence:

>525_bases
ATGACATCCACTTGCACGATCTGTGAACGAATCAAACTAATTCAGGCACATCAGAATCCTTATTTCGTTTACGAACTCAC
AACGGGCTACGTGGTCCTTGCTGATAGCCAGTACTTTGAAGGCTACACGCTCTTTTTAGCCAAACATCACGTTACCGAAT
TACATCATTTACCGGCACACGAGAAGTTACGATACCTTGAAGAGATGAGTATCGTCCAGGAAGCTTGTGCGCAGGCCTTT
CATGCAGACAAAATGAACATTGAACTACTCGGGAATGGTGACGCGCATGTTCATTGGCACTTATTTCCTCGCCATAACGG
TGATACGCCCAACCCCGGTCCCGTCTGGTGGACACCGCTGGAAACAATTTATGGTGATGATGTCAGTCTAGACATTCCCC
GTTTAAGCCGGTTGAAGCGCACGCTCAGCGTAGCAATTGAGGCCACGCTTAATGCTCGGGAAGCAGAATTGCAGGCTTTA
GAGGCACTCACAAGGCCTGCTAGCCACAGAATTGACAGCAATTAG

Upstream 100 bases:

>100_bases
TTTTCAGGTCGTCGTTTTTTAGACGTTTCACTAACATTTTTGATGTACTCACCACATCTACGCGTATACTTAATCTTATC
AAGACTCAGGAGGCGAGCGA

Downstream 100 bases:

>100_bases
ACCAAATCAGGACCCAGACCCGCTTAGATCTTGGTGGCTACACCCCAATTCTTAATCGCAATCCGTCACCGTATTTCAAA
TTGCCAAAATCCACCTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: HIT Family Protein; Diadenosine Tetraphosphate Hydrolase; HIT-Like Protein; HIT Domain-Containing Protein; Histidine Triad Family Hydrolase; Histidine Triad Hydrolase; Diadenosine Tetraphosphate

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTSTCTICERIKLIQAHQNPYFVYELTTGYVVLADSQYFEGYTLFLAKHHVTELHHLPAHEKLRYLEEMSIVQEACAQAF
HADKMNIELLGNGDAHVHWHLFPRHNGDTPNPGPVWWTPLETIYGDDVSLDIPRLSRLKRTLSVAIEATLNAREAELQAL
EALTRPASHRIDSN

Sequences:

>Translated_174_residues
MTSTCTICERIKLIQAHQNPYFVYELTTGYVVLADSQYFEGYTLFLAKHHVTELHHLPAHEKLRYLEEMSIVQEACAQAF
HADKMNIELLGNGDAHVHWHLFPRHNGDTPNPGPVWWTPLETIYGDDVSLDIPRLSRLKRTLSVAIEATLNAREAELQAL
EALTRPASHRIDSN
>Mature_173_residues
TSTCTICERIKLIQAHQNPYFVYELTTGYVVLADSQYFEGYTLFLAKHHVTELHHLPAHEKLRYLEEMSIVQEACAQAFH
ADKMNIELLGNGDAHVHWHLFPRHNGDTPNPGPVWWTPLETIYGDDVSLDIPRLSRLKRTLSVAIEATLNAREAELQALE
ALTRPASHRIDSN

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19855; Mature: 19724

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTCTICERIKLIQAHQNPYFVYELTTGYVVLADSQYFEGYTLFLAKHHVTELHHLPAH
CCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEHHHHHHHHCCCHH
EKLRYLEEMSIVQEACAQAFHADKMNIELLGNGDAHVHWHLFPRHNGDTPNPGPVWWTPL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCEEECCH
ETIYGDDVSLDIPRLSRLKRTLSVAIEATLNAREAELQALEALTRPASHRIDSN
HHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSTCTICERIKLIQAHQNPYFVYELTTGYVVLADSQYFEGYTLFLAKHHVTELHHLPAH
CCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEHHHHHHHHCCCHH
EKLRYLEEMSIVQEACAQAFHADKMNIELLGNGDAHVHWHLFPRHNGDTPNPGPVWWTPL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCEEECCH
ETIYGDDVSLDIPRLSRLKRTLSVAIEATLNAREAELQALEALTRPASHRIDSN
HHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA