| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379598
Identifier: 28379598
GI number: 28379598
Start: 2865822
End: 2866757
Strand: Direct
Name: 28379598
Synonym: lp_3218
Alternate gene names: NA
Gene position: 2865822-2866757 (Clockwise)
Preceding gene: 28379597
Following gene: 28379606
Centisome position: 86.63
GC content: 43.91
Gene sequence:
>936_bases ATGCGAAAGACAATTAGAGTTGGCATTATTTTATTAGTTGTTGGACTGCTTCTAATCATGTTTGGAATTGCCAATAACGG TATTCAAAGCGTCTATTGGGACCAGGGTTTTCACATTGTTCGCCATAAGACTCGGCGCTACCACGTCAGTCAGCTAAAAG ATATCACGATTGCAACGGCCAACAATATTACTATTAAGCAAGGCACAGCTGCTAATATCACGGTTACCGCCACGCGCGCC TTACCAACTGTTACGACCAACAATGGTCACGTCACTGTTACTTCAACGACACACAACGCCAAAACCGTGGGCTTCATGTT CGATAACGTCGGACAATTTGCTGACACGACAATAATTACGGTGCCTAAAGGAACTACTATTCATCAAATAACCGCCAAAG CTAGTCAAAGTGGTAACGTTTCGTTGCAAAAAGTTACCGTCGACCAATTGAAAAGTCTTAGTACGGATAGCGATATTAAT TTAACGGATGTCAAAGTCAATCAGTCGCTGACGTTGACCGGCGATAATTTACGGTTAACTCGTGTCTCGGCGCCTAGTCT ACAAATCAATAGCGATCCAGATATCAGCATCACCGACAGTCATTTTACCAAGACTGCTTCAAAAATTATAACCGCTGATA GCGACATCCATCTAACCAATAATCAGTTCAAAGCCCTTAAGCTAACAAGTAGCGAAGGTGATATTATGCTCAATAATAAT CGCATCACTGAAAGTTTATCCGCTACAGCCAGTGACGGTGATATTCGAATAACCGCGCCACGGACAACCGGTGTTAAAGC TAGCACTAGCGATGGGGACTTGCATATTTTCAATCATCTCCAGTCCGATGGCGGTGATTACCAGGTCAACCAATCGGCAG CCGTACAATACCGACTGACGACCAGCAATGGTGATATTACGGTTAGTGCTAGCTAG
Upstream 100 bases:
>100_bases TGGCTTATTAGCGTTATTCTGCAAGGAATTGCAAAAATCGTACAAAACCTATACCACCGATTTGTTAAGAAAAATCGGGC AGAACGAGGAGGTCACCACC
Downstream 100 bases:
>100_bases TCCATGCTAGTACTGCACTTACTCAAATTTTCAAAATAAAACCGCGACTTGCTCATGGCAAATCGCGGTTTTATCGTACT TACGTTTAGGATGCTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRKTIRVGIILLVVGLLLIMFGIANNGIQSVYWDQGFHIVRHKTRRYHVSQLKDITIATANNITIKQGTAANITVTATRA LPTVTTNNGHVTVTSTTHNAKTVGFMFDNVGQFADTTIITVPKGTTIHQITAKASQSGNVSLQKVTVDQLKSLSTDSDIN LTDVKVNQSLTLTGDNLRLTRVSAPSLQINSDPDISITDSHFTKTASKIITADSDIHLTNNQFKALKLTSSEGDIMLNNN RITESLSATASDGDIRITAPRTTGVKASTSDGDLHIFNHLQSDGGDYQVNQSAAVQYRLTTSNGDITVSAS
Sequences:
>Translated_311_residues MRKTIRVGIILLVVGLLLIMFGIANNGIQSVYWDQGFHIVRHKTRRYHVSQLKDITIATANNITIKQGTAANITVTATRA LPTVTTNNGHVTVTSTTHNAKTVGFMFDNVGQFADTTIITVPKGTTIHQITAKASQSGNVSLQKVTVDQLKSLSTDSDIN LTDVKVNQSLTLTGDNLRLTRVSAPSLQINSDPDISITDSHFTKTASKIITADSDIHLTNNQFKALKLTSSEGDIMLNNN RITESLSATASDGDIRITAPRTTGVKASTSDGDLHIFNHLQSDGGDYQVNQSAAVQYRLTTSNGDITVSAS >Mature_311_residues MRKTIRVGIILLVVGLLLIMFGIANNGIQSVYWDQGFHIVRHKTRRYHVSQLKDITIATANNITIKQGTAANITVTATRA LPTVTTNNGHVTVTSTTHNAKTVGFMFDNVGQFADTTIITVPKGTTIHQITAKASQSGNVSLQKVTVDQLKSLSTDSDIN LTDVKVNQSLTLTGDNLRLTRVSAPSLQINSDPDISITDSHFTKTASKIITADSDIHLTNNQFKALKLTSSEGDIMLNNN RITESLSATASDGDIRITAPRTTGVKASTSDGDLHIFNHLQSDGGDYQVNQSAAVQYRLTTSNGDITVSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33463; Mature: 33463
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTIRVGIILLVVGLLLIMFGIANNGIQSVYWDQGFHIVRHKTRRYHVSQLKDITIATA CCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCHHEEHHHCCEEEEEEC NNITIKQGTAANITVTATRALPTVTTNNGHVTVTSTTHNAKTVGFMFDNVGQFADTTIIT CCEEEECCCCCEEEEEEECCCCEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEE VPKGTTIHQITAKASQSGNVSLQKVTVDQLKSLSTDSDINLTDVKVNQSLTLTGDNLRLT ECCCCEEEEEEECCCCCCCEEEEEEEHHHHHCCCCCCCCEEEEEEECCEEEEECCCEEEE RVSAPSLQINSDPDISITDSHFTKTASKIITADSDIHLTNNQFKALKLTSSEGDIMLNNN EEECCCEEECCCCCEEEECCHHHHHHHHEEECCCCEEEECCCEEEEEEECCCCCEEECCC RITESLSATASDGDIRITAPRTTGVKASTSDGDLHIFNHLQSDGGDYQVNQSAAVQYRLT EEECHHCCCCCCCCEEEEECCCCCCEEECCCCCEEEEEECCCCCCCEEECCCEEEEEEEE TSNGDITVSAS ECCCCEEEEEC >Mature Secondary Structure MRKTIRVGIILLVVGLLLIMFGIANNGIQSVYWDQGFHIVRHKTRRYHVSQLKDITIATA CCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCHHEEHHHCCEEEEEEC NNITIKQGTAANITVTATRALPTVTTNNGHVTVTSTTHNAKTVGFMFDNVGQFADTTIIT CCEEEECCCCCEEEEEEECCCCEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEE VPKGTTIHQITAKASQSGNVSLQKVTVDQLKSLSTDSDINLTDVKVNQSLTLTGDNLRLT ECCCCEEEEEEECCCCCCCEEEEEEEHHHHHCCCCCCCCEEEEEEECCEEEEECCCEEEE RVSAPSLQINSDPDISITDSHFTKTASKIITADSDIHLTNNQFKALKLTSSEGDIMLNNN EEECCCEEECCCCCEEEECCHHHHHHHHEEECCCCEEEECCCEEEEEEECCCCCEEECCC RITESLSATASDGDIRITAPRTTGVKASTSDGDLHIFNHLQSDGGDYQVNQSAAVQYRLT EEECHHCCCCCCCCEEEEECCCCCCEEECCCCCEEEEEECCCCCCCEEECCCEEEEEEEE TSNGDITVSAS ECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA