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The map label for this gene is 28379402

Identifier: 28379402

GI number: 28379402

Start: 2637212

End: 2637835

Strand: Direct

Name: 28379402

Synonym: lp_2963

Alternate gene names: NA

Gene position: 2637212-2637835 (Clockwise)

Preceding gene: 28379394

Following gene: 28379408

Centisome position: 79.72

GC content: 47.6

Gene sequence:

>624_bases
ATGATGACAACTAACTATCCGCTTGCCGTACAGAAAATGTTCGCAACTGTCCCAACACTACTGACAGCGACACCCATCTT
TAAATTGACTGTCACCATGGTCGTCAAAGCAGCCCACGTTAGTCGTGGGAGTTTTTACAGTCACTTTCAAGATATTTACG
ACTTCATTCACGCTTTCGAACATGCTTTAATCGAACAAGCAACCGTTTCAAAGCAAGTCCTTAACCAAGGGATTCAAGCT
GCCCTGGTTCATCCGGACCCGCATAATGCTTATCCAACCTATCTGGAACTAACAACGAATATCAACACCCAATTGGCTAG
TTTTCAGGCCTTGCTTGGCCCCCATGGTGATCCACAGTTTCTTGATCAGCTTCAGGCCGGTCTCATTGATAATTTACTCG
CCACTACTGAGCAGGCGCCCTTAAATCATCAATATTTCCAGTCGATTCCGGCTGACTACGCCATGCCAATCTACTTTAGT
GGCGTGCTGACAATTATTCAGCACTGGCTGACTAAACCCCATCCGGAGCCACCTGAAGTGGTCGCCAACATTATCGTTCA
GAGCCGCTACACCGCGGCTTACCATCTCTTTTCCGACCGTCCGCTTGGGGACGATAATAACTAG

Upstream 100 bases:

>100_bases
TTAGCTGCACCTCGTTTTTTAGAATAACCATAGTCTAAGACCAAACGAGTGCGTTGGAAATGTACAATTGATGTCAAATT
GACCATTTACAGGAGGTGAC

Downstream 100 bases:

>100_bases
AAGCCAAACTAAAAGCTGGTCATAATCCCATAATTGTGGATTACGACCAGCTTTTAGTCACGACAGTCAATACTTATTAT
ATTCAGTGCATGGCCACGAT

Product: transcription regulator (putative)

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MMTTNYPLAVQKMFATVPTLLTATPIFKLTVTMVVKAAHVSRGSFYSHFQDIYDFIHAFEHALIEQATVSKQVLNQGIQA
ALVHPDPHNAYPTYLELTTNINTQLASFQALLGPHGDPQFLDQLQAGLIDNLLATTEQAPLNHQYFQSIPADYAMPIYFS
GVLTIIQHWLTKPHPEPPEVVANIIVQSRYTAAYHLFSDRPLGDDNN

Sequences:

>Translated_207_residues
MMTTNYPLAVQKMFATVPTLLTATPIFKLTVTMVVKAAHVSRGSFYSHFQDIYDFIHAFEHALIEQATVSKQVLNQGIQA
ALVHPDPHNAYPTYLELTTNINTQLASFQALLGPHGDPQFLDQLQAGLIDNLLATTEQAPLNHQYFQSIPADYAMPIYFS
GVLTIIQHWLTKPHPEPPEVVANIIVQSRYTAAYHLFSDRPLGDDNN
>Mature_207_residues
MMTTNYPLAVQKMFATVPTLLTATPIFKLTVTMVVKAAHVSRGSFYSHFQDIYDFIHAFEHALIEQATVSKQVLNQGIQA
ALVHPDPHNAYPTYLELTTNINTQLASFQALLGPHGDPQFLDQLQAGLIDNLLATTEQAPLNHQYFQSIPADYAMPIYFS
GVLTIIQHWLTKPHPEPPEVVANIIVQSRYTAAYHLFSDRPLGDDNN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23145; Mature: 23145

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTNYPLAVQKMFATVPTLLTATPIFKLTVTMVVKAAHVSRGSFYSHFQDIYDFIHAFE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HALIEQATVSKQVLNQGIQAALVHPDPHNAYPTYLELTTNINTQLASFQALLGPHGDPQF
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHH
LDQLQAGLIDNLLATTEQAPLNHQYFQSIPADYAMPIYFSGVLTIIQHWLTKPHPEPPEV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VANIIVQSRYTAAYHLFSDRPLGDDNN
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMTTNYPLAVQKMFATVPTLLTATPIFKLTVTMVVKAAHVSRGSFYSHFQDIYDFIHAFE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HALIEQATVSKQVLNQGIQAALVHPDPHNAYPTYLELTTNINTQLASFQALLGPHGDPQF
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHH
LDQLQAGLIDNLLATTEQAPLNHQYFQSIPADYAMPIYFSGVLTIIQHWLTKPHPEPPEV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VANIIVQSRYTAAYHLFSDRPLGDDNN
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA