| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is pts22CBA [H]
Identifier: 28379408
GI number: 28379408
Start: 2642875
End: 2644863
Strand: Direct
Name: pts22CBA [H]
Synonym: lp_2969
Alternate gene names: 28379408
Gene position: 2642875-2644863 (Clockwise)
Preceding gene: 28379402
Following gene: 28379425
Centisome position: 79.89
GC content: 47.61
Gene sequence:
>1989_bases TTGTACATGAAGAATTATTTGCAACGTATGGGCCGTTCACTGCAATTACCCGTTGCCGTTCTACCCGCAGCAGCTTTACT TGTGGGAATTGGTAACTGGTGGGCATCTGCTAGTAACGACATCGTCGCACACTTCTTACAAGCCGGTGGTAACGCTGTTC TGAGCCAATTACCACTACTATTTGCAGTTGGTTTGGCACTCGGTATGTCAAAAGATAAAGATGGCGCAGCCGCTCTTGCT GGTTTAGTTGCCTTTGAATTACCAACTAACGTTTTAAAACCAGAATCGGTCGCCACACTCTTGAATATCAAGGTAGCCAC TGTTAATCCAGCGTTTGGTCAAATTGGCAACGTCTTCATTGGGATCATCTCTGGTCTGATTGCCGCAGCTCTTTACAATC GCTTCCACGAGACCAAACTACCGATGGCTCTTTCATTTTTCAGTGGTAAACGTCTAGTCCCAATCTTAGCCGCGCTGACC ATGTTATTAGTCAGCGTCGCGCTTCTCATTGTTTGGCCGCCCGTCTATGATGCGTTAGTTACCTTTGGCAAATTCATCGT GGGTCTCGGTGCCGTTGGGGCCGGTCTCTATGGCTTCTTCAACCGCCTATTGATTCCAACTGGGTTGCACCAAGCACTCA ACTCCGTTTTCTGGTTTGACGTTGCTGGCATCAATGATATTGGTAAATTCTTAGCACACAAAGGGATCAAGGGTGTGACT GGGATGTACCAAGCTGGTTTCTTCCCAGTCATGATGTTTGGTTTACCAGCTGGGGCCTACGCGATTTACCGCAATGCGCT ACCAGAACGTAAAGTTGAAACGGCGTCCCTGATGATGGCCGGTGCGTTTGCGTCCTTCTTTACCGGTGTGACCGAACCAT TAGAGTTCTCATTTATGTTCGTAGCTTGGCCACTCTATGTTTTACACGCAATCTTCACTGGTTTATCGCTAGCCTTTGCT GCCTTCATGCACTGGACAGCCGGTTTTGCCTTCTCCGCCGGGTTAGTTGACTACATTTTAAGCCTTAAAAACCCGATTGC TAATCAACCTTTAATGTTGATCTTACAAGGATTGGTTCTAGCCGTCATTTACTACTTTGGCTTTGACTTCGCAATCAAGA AGTTCCATTTGATGACACCGGGCCGCGAACCAGTGACAGCCGATGACGCCGATGATTTAGCCATCGCCACTGATGCGGAT GATGACAAATACACACGTCAAGCCAAGCAAATTTACGCTGCGCTCGGTGGTGCCGATAATTTAACGGTTGTCGATAACTG CACGACCCGTCTCCGATTGCAATTAGCCGATACGTCAACCATTAATGAAGCCGCTATCAAACACAGTGGTGCTGCTGGTA TTAACAAATTAGACGACCATAATCTACAAATCATTATTGGGACCGAAGTCCAATTCGTCGCCGACGCGTTGAGCCGCTTA AAGCTCACGAACGCACCCATTACTAAGACCACGACTAGCAATGAAGCTGTTGCGACAGCACCAACTGCGACTAATATCAC TAGTGGTGTGACCACCGACTTTTACAGCGTCGCTAACGGTCAGTACGTAGATATTGAAAACGTCGACGACGACACATTTG CTAAGAAGATGCTGGGCGATGGCTTCGCAATTGATCCCGCAGACGGGACGATTACGGCGCCGGTCGACGGGACGGTCAGC ACCGTCTTTCCTACCAAGCATGCAATCGGTTTTAAAACCGATTCAGGGTTAGAAATTCTGCTGCATATGGGTATTGATAC CGTTGAGTTGAACGGTGCTCCCTTTGAAGTACTAGTCCAAACCGATCAACCCATTCACCATGGCGAAGTAGTTGCCAAAG CTGACCTGGCAGCGATTAAGGCTGCTGGTAAGGCCACAACCATGATGGTTATCATCACTAACATGGATGCTGTCAATTTG ATGAAATTCAAGATGTTGACCAACCAAGTCAAAGTCAGTGATGAGATTATGTTGGTCACGACGAAATAA
Upstream 100 bases:
>100_bases AAACCAATGGACTATACCAATAAAAAGCGGTTGTAATAGCGCTTTCAGCACCGTACAATAATGATTGCACTTATTCAAAA CTATCTTTTTAGGGGGGATT
Downstream 100 bases:
>100_bases CTTGTTGCATGCGCCAATTATATGAACAGCCCCCTACGTATTTGATACGCAGGGGGCTGTTTTCGATAATCAAATCGCCG GACAATTCTTTAAATTTTCC
Product: N-acetylglucosamine PTS, EIICBA
Products: NA
Alternate protein names: EIICBA-Glc; EII-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component; Glucose-specific phosphotransferase enzyme IIA component; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MYMKNYLQRMGRSLQLPVAVLPAAALLVGIGNWWASASNDIVAHFLQAGGNAVLSQLPLLFAVGLALGMSKDKDGAAALA GLVAFELPTNVLKPESVATLLNIKVATVNPAFGQIGNVFIGIISGLIAAALYNRFHETKLPMALSFFSGKRLVPILAALT MLLVSVALLIVWPPVYDALVTFGKFIVGLGAVGAGLYGFFNRLLIPTGLHQALNSVFWFDVAGINDIGKFLAHKGIKGVT GMYQAGFFPVMMFGLPAGAYAIYRNALPERKVETASLMMAGAFASFFTGVTEPLEFSFMFVAWPLYVLHAIFTGLSLAFA AFMHWTAGFAFSAGLVDYILSLKNPIANQPLMLILQGLVLAVIYYFGFDFAIKKFHLMTPGREPVTADDADDLAIATDAD DDKYTRQAKQIYAALGGADNLTVVDNCTTRLRLQLADTSTINEAAIKHSGAAGINKLDDHNLQIIIGTEVQFVADALSRL KLTNAPITKTTTSNEAVATAPTATNITSGVTTDFYSVANGQYVDIENVDDDTFAKKMLGDGFAIDPADGTITAPVDGTVS TVFPTKHAIGFKTDSGLEILLHMGIDTVELNGAPFEVLVQTDQPIHHGEVVAKADLAAIKAAGKATTMMVIITNMDAVNL MKFKMLTNQVKVSDEIMLVTTK
Sequences:
>Translated_662_residues MYMKNYLQRMGRSLQLPVAVLPAAALLVGIGNWWASASNDIVAHFLQAGGNAVLSQLPLLFAVGLALGMSKDKDGAAALA GLVAFELPTNVLKPESVATLLNIKVATVNPAFGQIGNVFIGIISGLIAAALYNRFHETKLPMALSFFSGKRLVPILAALT MLLVSVALLIVWPPVYDALVTFGKFIVGLGAVGAGLYGFFNRLLIPTGLHQALNSVFWFDVAGINDIGKFLAHKGIKGVT GMYQAGFFPVMMFGLPAGAYAIYRNALPERKVETASLMMAGAFASFFTGVTEPLEFSFMFVAWPLYVLHAIFTGLSLAFA AFMHWTAGFAFSAGLVDYILSLKNPIANQPLMLILQGLVLAVIYYFGFDFAIKKFHLMTPGREPVTADDADDLAIATDAD DDKYTRQAKQIYAALGGADNLTVVDNCTTRLRLQLADTSTINEAAIKHSGAAGINKLDDHNLQIIIGTEVQFVADALSRL KLTNAPITKTTTSNEAVATAPTATNITSGVTTDFYSVANGQYVDIENVDDDTFAKKMLGDGFAIDPADGTITAPVDGTVS TVFPTKHAIGFKTDSGLEILLHMGIDTVELNGAPFEVLVQTDQPIHHGEVVAKADLAAIKAAGKATTMMVIITNMDAVNL MKFKMLTNQVKVSDEIMLVTTK >Mature_662_residues MYMKNYLQRMGRSLQLPVAVLPAAALLVGIGNWWASASNDIVAHFLQAGGNAVLSQLPLLFAVGLALGMSKDKDGAAALA GLVAFELPTNVLKPESVATLLNIKVATVNPAFGQIGNVFIGIISGLIAAALYNRFHETKLPMALSFFSGKRLVPILAALT MLLVSVALLIVWPPVYDALVTFGKFIVGLGAVGAGLYGFFNRLLIPTGLHQALNSVFWFDVAGINDIGKFLAHKGIKGVT GMYQAGFFPVMMFGLPAGAYAIYRNALPERKVETASLMMAGAFASFFTGVTEPLEFSFMFVAWPLYVLHAIFTGLSLAFA AFMHWTAGFAFSAGLVDYILSLKNPIANQPLMLILQGLVLAVIYYFGFDFAIKKFHLMTPGREPVTADDADDLAIATDAD DDKYTRQAKQIYAALGGADNLTVVDNCTTRLRLQLADTSTINEAAIKHSGAAGINKLDDHNLQIIIGTEVQFVADALSRL KLTNAPITKTTTSNEAVATAPTATNITSGVTTDFYSVANGQYVDIENVDDDTFAKKMLGDGFAIDPADGTITAPVDGTVS TVFPTKHAIGFKTDSGLEILLHMGIDTVELNGAPFEVLVQTDQPIHHGEVVAKADLAAIKAAGKATTMMVIITNMDAVNL MKFKMLTNQVKVSDEIMLVTTK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=659, Percent_Identity=38.8467374810319, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI1787343, Length=475, Percent_Identity=37.4736842105263, Blast_Score=284, Evalue=1e-77, Organism=Escherichia coli, GI1787908, Length=534, Percent_Identity=32.5842696629214, Blast_Score=252, Evalue=6e-68, Organism=Escherichia coli, GI1788757, Length=128, Percent_Identity=40.625, Blast_Score=109, Evalue=6e-25, Organism=Escherichia coli, GI1790159, Length=158, Percent_Identity=37.9746835443038, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 70724; Mature: 70724
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMKNYLQRMGRSLQLPVAVLPAAALLVGIGNWWASASNDIVAHFLQAGGNAVLSQLPLL CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH FAVGLALGMSKDKDGAAALAGLVAFELPTNVLKPESVATLLNIKVATVNPAFGQIGNVFI HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEEEECCHHHHHHHHHH GIISGLIAAALYNRFHETKLPMALSFFSGKRLVPILAALTMLLVSVALLIVWPPVYDALV HHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TFGKFIVGLGAVGAGLYGFFNRLLIPTGLHQALNSVFWFDVAGINDIGKFLAHKGIKGVT HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCC GMYQAGFFPVMMFGLPAGAYAIYRNALPERKVETASLMMAGAFASFFTGVTEPLEFSFMF HHHHHCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAWPLYVLHAIFTGLSLAFAAFMHWTAGFAFSAGLVDYILSLKNPIANQPLMLILQGLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AVIYYFGFDFAIKKFHLMTPGREPVTADDADDLAIATDADDDKYTRQAKQIYAALGGADN HHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC LTVVDNCTTRLRLQLADTSTINEAAIKHSGAAGINKLDDHNLQIIIGTEVQFVADALSRL EEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH KLTNAPITKTTTSNEAVATAPTATNITSGVTTDFYSVANGQYVDIENVDDDTFAKKMLGD EECCCCCEEECCCCCCEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHCC GFAIDPADGTITAPVDGTVSTVFPTKHAIGFKTDSGLEILLHMGIDTVELNGAPFEVLVQ CCEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEE TDQPIHHGEVVAKADLAAIKAAGKATTMMVIITNMDAVNLMKFKMLTNQVKVSDEIMLVT CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCEEEEE TK EC >Mature Secondary Structure MYMKNYLQRMGRSLQLPVAVLPAAALLVGIGNWWASASNDIVAHFLQAGGNAVLSQLPLL CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH FAVGLALGMSKDKDGAAALAGLVAFELPTNVLKPESVATLLNIKVATVNPAFGQIGNVFI HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEEEECCHHHHHHHHHH GIISGLIAAALYNRFHETKLPMALSFFSGKRLVPILAALTMLLVSVALLIVWPPVYDALV HHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TFGKFIVGLGAVGAGLYGFFNRLLIPTGLHQALNSVFWFDVAGINDIGKFLAHKGIKGVT HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCC GMYQAGFFPVMMFGLPAGAYAIYRNALPERKVETASLMMAGAFASFFTGVTEPLEFSFMF HHHHHCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAWPLYVLHAIFTGLSLAFAAFMHWTAGFAFSAGLVDYILSLKNPIANQPLMLILQGLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AVIYYFGFDFAIKKFHLMTPGREPVTADDADDLAIATDADDDKYTRQAKQIYAALGGADN HHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC LTVVDNCTTRLRLQLADTSTINEAAIKHSGAAGINKLDDHNLQIIIGTEVQFVADALSRL EEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH KLTNAPITKTTTSNEAVATAPTATNITSGVTTDFYSVANGQYVDIENVDDDTFAKKMLGD EECCCCCEEECCCCCCEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHCC GFAIDPADGTITAPVDGTVSTVFPTKHAIGFKTDSGLEILLHMGIDTVELNGAPFEVLVQ CCEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEE TDQPIHHGEVVAKADLAAIKAAGKATTMMVIITNMDAVNLMKFKMLTNQVKVSDEIMLVT CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCEEEEE TK EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA