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The map label for this gene is 28379317

Identifier: 28379317

GI number: 28379317

Start: 2537954

End: 2539018

Strand: Direct

Name: 28379317

Synonym: lp_2847

Alternate gene names: NA

Gene position: 2537954-2539018 (Clockwise)

Preceding gene: 28379316

Following gene: 28379318

Centisome position: 76.72

GC content: 51.17

Gene sequence:

>1065_bases
ATGAAAATTAAACACCTATTATTATCCTCATTAGCAACAACTGGTGCCATTGCCCTTGGTGCAACTGCTGCTAAGGCCGA
TACGGTGACGGTCAAGGCTGGTGACACTGTCAGTGAAATCGCAGACACTCACAAAACAACCGTTGCCGCCGTTCAAAAGT
TGAACCATTTGAAGAACGTCAACTTAATCTACGTCGGGGACAAACTACAAGTTAACAAACACCAGACAGTTAAAATGACA
CGGGCCACCACCTCAGTAGCCACGCCAAGCACGACGACTACAATAACTAGTGCCGCCGTTCAAAATCCTACTAGCACCGT
TACCGCCACGTCAACGGTTAGTCAAAGCACAGCGAGTCAAGCCAGTGCCAGCTCAGTTACCAGTGCAGCCAGTCAAAGCA
GCACATCAGCCGTTAGCCAGAGCAGCACGAGTCAAAACAGCGCCAGCTCAGTTACCAGTGCAACGAGCCAAAGCGCGACG
TCGGCCGTTAGCCAAAGCAGTACTAGTCAAGCTAGTGCTAGTTCAGTCACTAGTACGACGAGCCAGAGTGCAACGTCGGC
CACTAGCCAAAGTAGTACTAGTCAAGCCAGTGCTAGTTCAGTCACTAGCACGACGAGCCAGAGTGCAACGTCGGCCGCTA
GCCAAAGCAGTACTAGTCAAGCCAGTGCTAGTTCAGTAAAAAGTGCGGCTAGTCAAAGTACAACGGTAACCAGTCAAAGC
ACGACGACCACCGCTAGTTCAGCCGCAACTAGTAGTGCAAGTACTAGCAGCACAACTGCCAGTCAAGCTAGCTCAAGCAC
GGCCAGTTCAACAACAAGCACGACAACCAGCTCGACTAGTACATCTGAGGCTGCTGCCAAGGCCTGGATTGCTGCTCGCG
AATCTGGTGGCTCCTACACCGTAACCAACGGTATTTACTATGGTAAATATCAACTTGGTCAATCCCTCTTAAATGGCGAT
TATTCTGCCGCCAACCAAGAAGCGACTGCCGACGCATACGTCGCTGGCCGTTACGGCTCATGGACTGCTGCTAAAGCGTT
CTGGCAAGCAAACGGCTGGTACTAA

Upstream 100 bases:

>100_bases
TCTAAAAAGTCCGTCAGTAAGCAAATTGCGCTTAACGAACCGCTTACATGATGGTAAACTTTAAGGGAAGTCTAATCTAG
TTTGGGAGTGAATCAATTAT

Downstream 100 bases:

>100_bases
TCAGCATCTGCAATTATCAAATTCAAGCTTTATCATTGACATCAAAGCCAGCGCGGACGACTCATCGTTCGCACTGGCTT
TTTTCATTAAGATATAGCAG

Product: extracellular protein

Products: NA

Alternate protein names: Extracellular Protein; Aggregation Promoting Factor-Like Surface Protein; Aggregation Promoting Factor; Agregation Promoting Protein; LysM Domain-Containing Protein; LysM Domain Protein; Surface Protein Aggregation Promoting Factor; Extracellular Surface Protein; Cell-Wall Hydrolase; Membrane Protease Subunit Stomatin/Prohibitin Family; Aggregation Promoting Factor Surface Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; SH3 Type 3 Domain Protein; Cell Surface Protein; LysM Repeat-Containing Protein; Aggregation Promoting Factrelated Surface Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKIKHLLLSSLATTGAIALGATAAKADTVTVKAGDTVSEIADTHKTTVAAVQKLNHLKNVNLIYVGDKLQVNKHQTVKMT
RATTSVATPSTTTTITSAAVQNPTSTVTATSTVSQSTASQASASSVTSAASQSSTSAVSQSSTSQNSASSVTSATSQSAT
SAVSQSSTSQASASSVTSTTSQSATSATSQSSTSQASASSVTSTTSQSATSAASQSSTSQASASSVKSAASQSTTVTSQS
TTTTASSAATSSASTSSTTASQASSSTASSTTSTTTSSTSTSEAAAKAWIAARESGGSYTVTNGIYYGKYQLGQSLLNGD
YSAANQEATADAYVAGRYGSWTAAKAFWQANGWY

Sequences:

>Translated_354_residues
MKIKHLLLSSLATTGAIALGATAAKADTVTVKAGDTVSEIADTHKTTVAAVQKLNHLKNVNLIYVGDKLQVNKHQTVKMT
RATTSVATPSTTTTITSAAVQNPTSTVTATSTVSQSTASQASASSVTSAASQSSTSAVSQSSTSQNSASSVTSATSQSAT
SAVSQSSTSQASASSVTSTTSQSATSATSQSSTSQASASSVTSTTSQSATSAASQSSTSQASASSVKSAASQSTTVTSQS
TTTTASSAATSSASTSSTTASQASSSTASSTTSTTTSSTSTSEAAAKAWIAARESGGSYTVTNGIYYGKYQLGQSLLNGD
YSAANQEATADAYVAGRYGSWTAAKAFWQANGWY
>Mature_354_residues
MKIKHLLLSSLATTGAIALGATAAKADTVTVKAGDTVSEIADTHKTTVAAVQKLNHLKNVNLIYVGDKLQVNKHQTVKMT
RATTSVATPSTTTTITSAAVQNPTSTVTATSTVSQSTASQASASSVTSAASQSSTSAVSQSSTSQNSASSVTSATSQSAT
SAVSQSSTSQASASSVTSTTSQSATSATSQSSTSQASASSVTSTTSQSATSAASQSSTSQASASSVKSAASQSTTVTSQS
TTTTASSAATSSASTSSTTASQASSSTASSTTSTTTSSTSTSEAAAKAWIAARESGGSYTVTNGIYYGKYQLGQSLLNGD
YSAANQEATADAYVAGRYGSWTAAKAFWQANGWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35025; Mature: 35025

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKHLLLSSLATTGAIALGATAAKADTVTVKAGDTVSEIADTHKTTVAAVQKLNHLKNV
CCHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
NLIYVGDKLQVNKHQTVKMTRATTSVATPSTTTTITSAAVQNPTSTVTATSTVSQSTASQ
CEEEECCEEEECCCCEEEEEEHHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
ASASSVTSAASQSSTSAVSQSSTSQNSASSVTSATSQSATSAVSQSSTSQASASSVTSTT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
SQSATSATSQSSTSQASASSVTSTTSQSATSAASQSSTSQASASSVKSAASQSTTVTSQS
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCC
TTTTASSAATSSASTSSTTASQASSSTASSTTSTTTSSTSTSEAAAKAWIAARESGGSYT
CCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
VTNGIYYGKYQLGQSLLNGDYSAANQEATADAYVAGRYGSWTAAKAFWQANGWY
EECCEEECHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIKHLLLSSLATTGAIALGATAAKADTVTVKAGDTVSEIADTHKTTVAAVQKLNHLKNV
CCHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
NLIYVGDKLQVNKHQTVKMTRATTSVATPSTTTTITSAAVQNPTSTVTATSTVSQSTASQ
CEEEECCEEEECCCCEEEEEEHHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
ASASSVTSAASQSSTSAVSQSSTSQNSASSVTSATSQSATSAVSQSSTSQASASSVTSTT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
SQSATSATSQSSTSQASASSVTSTTSQSATSAASQSSTSQASASSVKSAASQSTTVTSQS
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCC
TTTTASSAATSSASTSSTTASQASSSTASSTTSTTTSSTSTSEAAAKAWIAARESGGSYT
CCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
VTNGIYYGKYQLGQSLLNGDYSAANQEATADAYVAGRYGSWTAAKAFWQANGWY
EECCEEECHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA