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The map label for this gene is 28379283

Identifier: 28379283

GI number: 28379283

Start: 2494451

End: 2495227

Strand: Direct

Name: 28379283

Synonym: lp_2800

Alternate gene names: NA

Gene position: 2494451-2495227 (Clockwise)

Preceding gene: 28379282

Following gene: 28379286

Centisome position: 75.4

GC content: 46.85

Gene sequence:

>777_bases
TTGCTCGTCGTCATCGCACTAAAACCGCTTAGTGCGTCACCGATCTTTACGCCCGCATCGTCGCTCTACGCCTGCGGACT
CACTGACTTTTTTGTAACGTTGATCGATAATCTATTCGCCACCGCTGACAGCGCAAAAAACTGTCAGCGGTGGTTTTGGT
ATTACCAACCGTTGCTAGTAGGCATGCGTGTTCACGTAACATTTCAGTCACTAATTTGCGGCTCACAATCTTACACTTTT
TACACGTTTAGCGGTATGATTCTTAGTGAATATAGTCAATCCAAATTTACCAAGCAGTCGCTCTTCAAGGAGGTTCTTAT
TATGGCTACCGTCGACGCTCTCGACATGTTTTTGACCGATTATGCCAATATCTCTCGTTACCTGAATACTCGCTTAAATT
CACTACTGGCCACGCAACATCTTACCTTTGACGCTTTTTTAATCATGCATGAAATAGGTCAAAGCCCCCAGCCACTATTA
TTAATGGAGATCGCACATCAGCACCATGTCTCACGCAGCGCAATCTCACGCCAAATCGGAGTCCTCCTCAAACATCGATA
CATTGAGCAACAGGCTAATGCCACTGATCGCCGCCAAAAAGGACTTTCCTTAACGGCTACCGGCCGTCACCTAGATCAGC
AACTAATGGCCACCATGCACAAAACGGTTCACCAGTGGACGACTCAATTGGGCCCGCAACGGGTGAAGACCCTGCTAGGC
ATCTTCACTGACTTTAACGAGCAAATTATCAATAATGAGGTTCCCGCCAGCGATTAA

Upstream 100 bases:

>100_bases
ACTTCCTACGCTAGCAATCCTAGCAGTTGGCTCTTCCAACTGACTTTAAATATTCTAACGCCAATTATCTTTGTTGCCTT
AGGGATGATTTTGCCGATGA

Downstream 100 bases:

>100_bases
TAACCAGCCATCCTCAGCTTCATCATTCGGCATTAGTCGTAACGTGCCCCATTTTAGTAAGCTGATTTTTATTCGTCGCC
ATTTCAAGTTACGGCTTTTA

Product: transcription regulator (putative)

Products: NA

Alternate protein names: Transcriptional Regulator; MarR Family Transcriptional Regulator

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLVVIALKPLSASPIFTPASSLYACGLTDFFVTLIDNLFATADSAKNCQRWFWYYQPLLVGMRVHVTFQSLICGSQSYTF
YTFSGMILSEYSQSKFTKQSLFKEVLIMATVDALDMFLTDYANISRYLNTRLNSLLATQHLTFDAFLIMHEIGQSPQPLL
LMEIAHQHHVSRSAISRQIGVLLKHRYIEQQANATDRRQKGLSLTATGRHLDQQLMATMHKTVHQWTTQLGPQRVKTLLG
IFTDFNEQIINNEVPASD

Sequences:

>Translated_258_residues
MLVVIALKPLSASPIFTPASSLYACGLTDFFVTLIDNLFATADSAKNCQRWFWYYQPLLVGMRVHVTFQSLICGSQSYTF
YTFSGMILSEYSQSKFTKQSLFKEVLIMATVDALDMFLTDYANISRYLNTRLNSLLATQHLTFDAFLIMHEIGQSPQPLL
LMEIAHQHHVSRSAISRQIGVLLKHRYIEQQANATDRRQKGLSLTATGRHLDQQLMATMHKTVHQWTTQLGPQRVKTLLG
IFTDFNEQIINNEVPASD
>Mature_258_residues
MLVVIALKPLSASPIFTPASSLYACGLTDFFVTLIDNLFATADSAKNCQRWFWYYQPLLVGMRVHVTFQSLICGSQSYTF
YTFSGMILSEYSQSKFTKQSLFKEVLIMATVDALDMFLTDYANISRYLNTRLNSLLATQHLTFDAFLIMHEIGQSPQPLL
LMEIAHQHHVSRSAISRQIGVLLKHRYIEQQANATDRRQKGLSLTATGRHLDQQLMATMHKTVHQWTTQLGPQRVKTLLG
IFTDFNEQIINNEVPASD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29330; Mature: 29330

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVIALKPLSASPIFTPASSLYACGLTDFFVTLIDNLFATADSAKNCQRWFWYYQPLLV
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GMRVHVTFQSLICGSQSYTFYTFSGMILSEYSQSKFTKQSLFKEVLIMATVDALDMFLTD
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YANISRYLNTRLNSLLATQHLTFDAFLIMHEIGQSPQPLLLMEIAHQHHVSRSAISRQIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VLLKHRYIEQQANATDRRQKGLSLTATGRHLDQQLMATMHKTVHQWTTQLGPQRVKTLLG
HHHHHHHHHHHCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IFTDFNEQIINNEVPASD
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLVVIALKPLSASPIFTPASSLYACGLTDFFVTLIDNLFATADSAKNCQRWFWYYQPLLV
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GMRVHVTFQSLICGSQSYTFYTFSGMILSEYSQSKFTKQSLFKEVLIMATVDALDMFLTD
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YANISRYLNTRLNSLLATQHLTFDAFLIMHEIGQSPQPLLLMEIAHQHHVSRSAISRQIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VLLKHRYIEQQANATDRRQKGLSLTATGRHLDQQLMATMHKTVHQWTTQLGPQRVKTLLG
HHHHHHHHHHHCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IFTDFNEQIINNEVPASD
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA