Click here to switch to the map view.

The map label for this gene is epsH [H]

Identifier: 28379268

GI number: 28379268

Start: 2473889

End: 2474623

Strand: Direct

Name: epsH [H]

Synonym: lp_2783

Alternate gene names: 28379268

Gene position: 2473889-2474623 (Clockwise)

Preceding gene: 28379267

Following gene: 28379269

Centisome position: 74.78

GC content: 47.48

Gene sequence:

>735_bases
GTGTCAGCACCCCTTTTTTCAGTGGTTGTACCAGCTTACAACCAGCACAAATTTATAGATAGCTGCTTGACTAGTCTACA
ACGCCAAACCTTGACAGACTTTGAAGTCTTCGTGGTTGATGATTGTTCGACTGATGACACTGGTGAACAGATTGCCGCGT
TAATCAAAGGCGACGACCGGTTCCACGTGATCACTCACGCCCATAACCGGGGCGTCTCCGCAGCTCGTAACTCCGGTATG
GCTGCTGCTAAGGGTAAGTACCTTTGCTTTGTCGATGGCGACGATTGGGTCGAACCAGACTTTCTGGCAACCTTCTTAGC
CGCCTACCGGTCAGCACCCGATACCCAGCTCGTTGTATGCGGTCACTACGGTTACTTAGCCGTTCCGAGTCCTGCCAAAA
CATACAACCAAAAAGACTTGATTGCCAACATCAACTTTGGCACGGTTGGCGGTTTTTCGTGGAATAAAGCATTCATTCGC
AGTATTATTACCACGCACCACCTCAAGTTCAACGAAGATATTGATTTTCTTGAAGACCAGTTGTTTGCCTTTCGTTACGC
TAACTACGTACAGTCCTCCGAATACGTACCGGACCGGACTTACCATTACCGTTGGCGTTTTCGAAGCAACCTTGCTCACA
TTGGAATTCCATTCTTCACCGCTCGTCGTAAGATGATGAAGATTCTCAAGCAGGAAAACAAGCAAGTTTTGAACGAAGAT
TGGAATAATCAGTAG

Upstream 100 bases:

>100_bases
ATAATTAATTTATGGCTAAAAAAAGACGATTCACTATAATTTCATCACAATTTATGGGTATACTAGTAACAGTATCCAAA
TTTACGATGGAGGAATTAGC

Downstream 100 bases:

>100_bases
CAACGTTACGTTGCCATCGCCCCTAAAGGTCGGTAGCTGAAATAGCTATCACCCTTTAGGGGATTTTTTGATACCTAGCA
TAATCGGCCACGATGACCAG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSAPLFSVVVPAYNQHKFIDSCLTSLQRQTLTDFEVFVVDDCSTDDTGEQIAALIKGDDRFHVITHAHNRGVSAARNSGM
AAAKGKYLCFVDGDDWVEPDFLATFLAAYRSAPDTQLVVCGHYGYLAVPSPAKTYNQKDLIANINFGTVGGFSWNKAFIR
SIITTHHLKFNEDIDFLEDQLFAFRYANYVQSSEYVPDRTYHYRWRFRSNLAHIGIPFFTARRKMMKILKQENKQVLNED
WNNQ

Sequences:

>Translated_244_residues
MSAPLFSVVVPAYNQHKFIDSCLTSLQRQTLTDFEVFVVDDCSTDDTGEQIAALIKGDDRFHVITHAHNRGVSAARNSGM
AAAKGKYLCFVDGDDWVEPDFLATFLAAYRSAPDTQLVVCGHYGYLAVPSPAKTYNQKDLIANINFGTVGGFSWNKAFIR
SIITTHHLKFNEDIDFLEDQLFAFRYANYVQSSEYVPDRTYHYRWRFRSNLAHIGIPFFTARRKMMKILKQENKQVLNED
WNNQ
>Mature_243_residues
SAPLFSVVVPAYNQHKFIDSCLTSLQRQTLTDFEVFVVDDCSTDDTGEQIAALIKGDDRFHVITHAHNRGVSAARNSGMA
AAKGKYLCFVDGDDWVEPDFLATFLAAYRSAPDTQLVVCGHYGYLAVPSPAKTYNQKDLIANINFGTVGGFSWNKAFIRS
IITTHHLKFNEDIDFLEDQLFAFRYANYVQSSEYVPDRTYHYRWRFRSNLAHIGIPFFTARRKMMKILKQENKQVLNEDW
NNQ

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=213, Percent_Identity=27.6995305164319, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788372, Length=104, Percent_Identity=33.6538461538462, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 27914; Mature: 27782

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPLFSVVVPAYNQHKFIDSCLTSLQRQTLTDFEVFVVDDCSTDDTGEQIAALIKGDDR
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCE
FHVITHAHNRGVSAARNSGMAAAKGKYLCFVDGDDWVEPDFLATFLAAYRSAPDTQLVVC
EEEEEECCCCCCHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEE
GHYGYLAVPSPAKTYNQKDLIANINFGTVGGFSWNKAFIRSIITTHHLKFNEDIDFLEDQ
ECCCEEEECCCHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCEECCCCHHHHHHH
LFAFRYANYVQSSEYVPDRTYHYRWRFRSNLAHIGIPFFTARRKMMKILKQENKQVLNED
HHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
WNNQ
CCCC
>Mature Secondary Structure 
SAPLFSVVVPAYNQHKFIDSCLTSLQRQTLTDFEVFVVDDCSTDDTGEQIAALIKGDDR
CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCE
FHVITHAHNRGVSAARNSGMAAAKGKYLCFVDGDDWVEPDFLATFLAAYRSAPDTQLVVC
EEEEEECCCCCCHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEE
GHYGYLAVPSPAKTYNQKDLIANINFGTVGGFSWNKAFIRSIITTHHLKFNEDIDFLEDQ
ECCCEEEECCCHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCEECCCCHHHHHHH
LFAFRYANYVQSSEYVPDRTYHYRWRFRSNLAHIGIPFFTARRKMMKILKQENKQVLNED
HHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
WNNQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]