| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
Click here to switch to the map view.
The map label for this gene is gtcA2 [H]
Identifier: 28379238
GI number: 28379238
Start: 2443959
End: 2444375
Strand: Direct
Name: gtcA2 [H]
Synonym: lp_2747
Alternate gene names: 28379238
Gene position: 2443959-2444375 (Clockwise)
Preceding gene: 28379236
Following gene: 28379240
Centisome position: 73.87
GC content: 37.89
Gene sequence:
>417_bases GTGGGACAACTTATCAAACAACTCTGGCAACGCTATCAAAGCGTCCTTTCCTATTTAATCTTTGGGGGCTTAACCACCCT AATTAATATTATTGTTTTTGGAATTTTCAACCAATTCTGGCCCTACTGGATAGCCAATACGATTGCCTGGCTCATCTCAG TGCTATTCGCCTATATCACGAATAAAATTTGGGTATTTGACTCACAAACACCTACTTTCCGTGCTGTTTTAATTGAAATG ACATCATTCTTCGGATTCCGCCTACTCAGTTACTTTATTGACCAGGGGATTATGATTGTCGGTATTTCGGTTCTGCACGG AAACGACCTTATCGTCAAATTAATTGATCAAATTATTGTGGTATTACTCAATTGGTTCTTCAGTAAACTATTTATTTTCA AGGATCGTGGTCATTAA
Upstream 100 bases:
>100_bases GCCACCAACTTGAATCGCACTAAAAATATCCAACACGCAGCCATTTAATTATGATAGGATGGTACCTAGTAATAATCAGC TAAAGTGAGGGTATTCATCT
Downstream 100 bases:
>100_bases AGCGAACCAACTTAAACATCAAAACAAGCGTCGTAGGAATGTCCGAAAATTCCTGCGACGCTTATTTTATTCATAATAAT TACCGACCCATCTTTTTTCT
Product: teichoic acid glycosylation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MGQLIKQLWQRYQSVLSYLIFGGLTTLINIIVFGIFNQFWPYWIANTIAWLISVLFAYITNKIWVFDSQTPTFRAVLIEM TSFFGFRLLSYFIDQGIMIVGISVLHGNDLIVKLIDQIIVVLLNWFFSKLFIFKDRGH
Sequences:
>Translated_138_residues MGQLIKQLWQRYQSVLSYLIFGGLTTLINIIVFGIFNQFWPYWIANTIAWLISVLFAYITNKIWVFDSQTPTFRAVLIEM TSFFGFRLLSYFIDQGIMIVGISVLHGNDLIVKLIDQIIVVLLNWFFSKLFIFKDRGH >Mature_137_residues GQLIKQLWQRYQSVLSYLIFGGLTTLINIIVFGIFNQFWPYWIANTIAWLISVLFAYITNKIWVFDSQTPTFRAVLIEMT SFFGFRLLSYFIDQGIMIVGISVLHGNDLIVKLIDQIIVVLLNWFFSKLFIFKDRGH
Specific function: Involved in the decoration of cell wall teichoic acid with galactose and glucose [H]
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gtrA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007267 [H]
Pfam domain/function: PF04138 GtrA [H]
EC number: NA
Molecular weight: Translated: 16195; Mature: 16063
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQLIKQLWQRYQSVLSYLIFGGLTTLINIIVFGIFNQFWPYWIANTIAWLISVLFAYIT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKIWVFDSQTPTFRAVLIEMTSFFGFRLLSYFIDQGIMIVGISVLHGNDLIVKLIDQIIV CHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHH VLLNWFFSKLFIFKDRGH HHHHHHHHHHHHHHCCCC >Mature Secondary Structure GQLIKQLWQRYQSVLSYLIFGGLTTLINIIVFGIFNQFWPYWIANTIAWLISVLFAYIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKIWVFDSQTPTFRAVLIEMTSFFGFRLLSYFIDQGIMIVGISVLHGNDLIVKLIDQIIV CHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHH VLLNWFFSKLFIFKDRGH HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]