Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is 28379240

Identifier: 28379240

GI number: 28379240

Start: 2445164

End: 2445490

Strand: Direct

Name: 28379240

Synonym: lp_2749

Alternate gene names: NA

Gene position: 2445164-2445490 (Clockwise)

Preceding gene: 28379238

Following gene: 28379244

Centisome position: 73.91

GC content: 48.93

Gene sequence:

>327_bases
ATGACATTTACAAATCAAGAAACTGACTATCTTATGAACCTACTAACCAACCAGTTAATGGCCCTACTAAGCCGCGTCAC
GCGCTGGCAGACGCACAGTCTGAGTCAACACCAATATGACCAACAAGTACACGAAACGCTCCAACCCGAACTGACCATGC
TCACGCAAATCACTGCTAAACTCCAGGGACAAGCCCGTGACCAAACTCAGCTAGGGGCCATTCAAACTGGTTTGAAGAAA
CTTCAAGTTGCCACCACCTATCAGCTAACTGCCGACCAACTTGCACACGCTAATGAACGCCGGCTGAATCGCCGATACCG
CGATTAA

Upstream 100 bases:

>100_bases
CAGTCGTTTTTACCATTTTTTATTAAAATAGTAATTAAATTATCCTTACTCATGCTAATATTTGAGTTAACCAACTTTAT
TGATCGGAGGTCCCGTTTTG

Downstream 100 bases:

>100_bases
CTTTTACAACATCAGCATATTTACCAGGAGATTCAAAACTATTTCGCAATCCTTAACAGAAAATTCAAATTTCAATCACG
AGTTAGCTACTTTTTCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAKLQGQARDQTQLGAIQTGLKK
LQVATTYQLTADQLAHANERRLNRRYRD

Sequences:

>Translated_108_residues
MTFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAKLQGQARDQTQLGAIQTGLKK
LQVATTYQLTADQLAHANERRLNRRYRD
>Mature_107_residues
TFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAKLQGQARDQTQLGAIQTGLKKL
QVATTYQLTADQLAHANERRLNRRYRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12615; Mature: 12483

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHH
LQGQARDQTQLGAIQTGLKKLQVATTYQLTADQLAHANERRLNRRYRD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHH
LQGQARDQTQLGAIQTGLKKLQVATTYQLTADQLAHANERRLNRRYRD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA