| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379240
Identifier: 28379240
GI number: 28379240
Start: 2445164
End: 2445490
Strand: Direct
Name: 28379240
Synonym: lp_2749
Alternate gene names: NA
Gene position: 2445164-2445490 (Clockwise)
Preceding gene: 28379238
Following gene: 28379244
Centisome position: 73.91
GC content: 48.93
Gene sequence:
>327_bases ATGACATTTACAAATCAAGAAACTGACTATCTTATGAACCTACTAACCAACCAGTTAATGGCCCTACTAAGCCGCGTCAC GCGCTGGCAGACGCACAGTCTGAGTCAACACCAATATGACCAACAAGTACACGAAACGCTCCAACCCGAACTGACCATGC TCACGCAAATCACTGCTAAACTCCAGGGACAAGCCCGTGACCAAACTCAGCTAGGGGCCATTCAAACTGGTTTGAAGAAA CTTCAAGTTGCCACCACCTATCAGCTAACTGCCGACCAACTTGCACACGCTAATGAACGCCGGCTGAATCGCCGATACCG CGATTAA
Upstream 100 bases:
>100_bases CAGTCGTTTTTACCATTTTTTATTAAAATAGTAATTAAATTATCCTTACTCATGCTAATATTTGAGTTAACCAACTTTAT TGATCGGAGGTCCCGTTTTG
Downstream 100 bases:
>100_bases CTTTTACAACATCAGCATATTTACCAGGAGATTCAAAACTATTTCGCAATCCTTAACAGAAAATTCAAATTTCAATCACG AGTTAGCTACTTTTTCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAKLQGQARDQTQLGAIQTGLKK LQVATTYQLTADQLAHANERRLNRRYRD
Sequences:
>Translated_108_residues MTFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAKLQGQARDQTQLGAIQTGLKK LQVATTYQLTADQLAHANERRLNRRYRD >Mature_107_residues TFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAKLQGQARDQTQLGAIQTGLKKL QVATTYQLTADQLAHANERRLNRRYRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12615; Mature: 12483
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHH LQGQARDQTQLGAIQTGLKKLQVATTYQLTADQLAHANERRLNRRYRD HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFTNQETDYLMNLLTNQLMALLSRVTRWQTHSLSQHQYDQQVHETLQPELTMLTQITAK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHH LQGQARDQTQLGAIQTGLKKLQVATTYQLTADQLAHANERRLNRRYRD HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA