| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379144
Identifier: 28379144
GI number: 28379144
Start: 2339177
End: 2340028
Strand: Direct
Name: 28379144
Synonym: lp_2623
Alternate gene names: NA
Gene position: 2339177-2340028 (Clockwise)
Preceding gene: 28379143
Following gene: 28379148
Centisome position: 70.71
GC content: 47.3
Gene sequence:
>852_bases ATGAATCCCAAGAAGTTAAAACAATTAAAAAAGCGGGTCAAAAAGCAAGCCGGTGCCCCGTATATTCAACAGTTAATGAA GTACCGCGACTTATTTAAGGATGATCCCCAAATTCTAGTGCTGATCAATAATGTCTTGGAAAGTGACCGCTTGCTGGCAG CCGGCTTAGCTCCCCAACAATTGCCAGTCTTAGAAATCCCTGATGATTTTCAGGACCATCTCTTTGAGCGCATCAATCAG CAATATGCCATGGGTGATCCTGCTGGTGATGCGGCTTGGAACCAACTATCAGCCGCTCTCCCAAAAGTTGACCAACTTCT ACGCAACTTTCGAGACTATATCGAAGATCAGTATGGGATGTGGGCCTACATCAGTGCGCCATTTCTGAAAGACCTAGCTG ACTTCACCGGCAGCGCACCAGTTCTGGAAGTCATGGCCGGTAACGGCTATATTTCCAAGGGCCTCAAACGTCTCCATCCT GGTCAGCCAATTTATACCACGGATTCAAAGGATTGGACACACGAAACTGGCAATCAGACGGGACGCCACCCAGTCACGAC GATTGAAGCGTTGGATGCCGTCAGTGCCTTCAATAAGTACGCCGCAACTATTAAATACGTCATTATGGCCTGGTCACCGG ACAAATTGACTATTGATTGGGACTTGTTACAAGCTATGCGGCAAAGTCCTTACGATATCCCATTGATCGTCATTGGCGAA AAATACGGCGCCACGGGTTCCAAACAATTTTGGGACCACGCTAATTATCAGGATAACGAGGCCGTTACCAAGTTAAATGC TCATTTCCGACCATTCGACCTGATTCACGACCACGTCTATGTGGTCCGATAA
Upstream 100 bases:
>100_bases GTTGATGGATGGTTACTTACATGGTCGCCAGCATCGAGTTTCAACGGATGCGACCGGCCAAGAAGAATTAGACTTACACT TTGATGACTAGGAGTTTTTT
Downstream 100 bases:
>100_bases TTGAACACGCGTTAAATTAAAGTCGTGCTTTCAGGATTAAATTCTGAGAGCACGACTTTTAATTTTTCCGTCATAGCTGA ATCTCTTTTTTGCCAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Methionine Aminopeptidase; Sam-Dependent Methyltransferase
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNPKKLKQLKKRVKKQAGAPYIQQLMKYRDLFKDDPQILVLINNVLESDRLLAAGLAPQQLPVLEIPDDFQDHLFERINQ QYAMGDPAGDAAWNQLSAALPKVDQLLRNFRDYIEDQYGMWAYISAPFLKDLADFTGSAPVLEVMAGNGYISKGLKRLHP GQPIYTTDSKDWTHETGNQTGRHPVTTIEALDAVSAFNKYAATIKYVIMAWSPDKLTIDWDLLQAMRQSPYDIPLIVIGE KYGATGSKQFWDHANYQDNEAVTKLNAHFRPFDLIHDHVYVVR
Sequences:
>Translated_283_residues MNPKKLKQLKKRVKKQAGAPYIQQLMKYRDLFKDDPQILVLINNVLESDRLLAAGLAPQQLPVLEIPDDFQDHLFERINQ QYAMGDPAGDAAWNQLSAALPKVDQLLRNFRDYIEDQYGMWAYISAPFLKDLADFTGSAPVLEVMAGNGYISKGLKRLHP GQPIYTTDSKDWTHETGNQTGRHPVTTIEALDAVSAFNKYAATIKYVIMAWSPDKLTIDWDLLQAMRQSPYDIPLIVIGE KYGATGSKQFWDHANYQDNEAVTKLNAHFRPFDLIHDHVYVVR >Mature_283_residues MNPKKLKQLKKRVKKQAGAPYIQQLMKYRDLFKDDPQILVLINNVLESDRLLAAGLAPQQLPVLEIPDDFQDHLFERINQ QYAMGDPAGDAAWNQLSAALPKVDQLLRNFRDYIEDQYGMWAYISAPFLKDLADFTGSAPVLEVMAGNGYISKGLKRLHP GQPIYTTDSKDWTHETGNQTGRHPVTTIEALDAVSAFNKYAATIKYVIMAWSPDKLTIDWDLLQAMRQSPYDIPLIVIGE KYGATGSKQFWDHANYQDNEAVTKLNAHFRPFDLIHDHVYVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32234; Mature: 32234
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPKKLKQLKKRVKKQAGAPYIQQLMKYRDLFKDDPQILVLINNVLESDRLLAAGLAPQQ CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHECCCCCCC LPVLEIPDDFQDHLFERINQQYAMGDPAGDAAWNQLSAALPKVDQLLRNFRDYIEDQYGM CCEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WAYISAPFLKDLADFTGSAPVLEVMAGNGYISKGLKRLHPGQPIYTTDSKDWTHETGNQT EEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCC GRHPVTTIEALDAVSAFNKYAATIKYVIMAWSPDKLTIDWDLLQAMRQSPYDIPLIVIGE CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHHHCCCCCCEEEEEEC KYGATGSKQFWDHANYQDNEAVTKLNAHFRPFDLIHDHVYVVR CCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCHHHHHCCEEEEC >Mature Secondary Structure MNPKKLKQLKKRVKKQAGAPYIQQLMKYRDLFKDDPQILVLINNVLESDRLLAAGLAPQQ CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHECCCCCCC LPVLEIPDDFQDHLFERINQQYAMGDPAGDAAWNQLSAALPKVDQLLRNFRDYIEDQYGM CCEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WAYISAPFLKDLADFTGSAPVLEVMAGNGYISKGLKRLHPGQPIYTTDSKDWTHETGNQT EEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCC GRHPVTTIEALDAVSAFNKYAATIKYVIMAWSPDKLTIDWDLLQAMRQSPYDIPLIVIGE CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHHHCCCCCCEEEEEEC KYGATGSKQFWDHANYQDNEAVTKLNAHFRPFDLIHDHVYVVR CCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA