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The map label for this gene is 28379143

Identifier: 28379143

GI number: 28379143

Start: 2338751

End: 2339167

Strand: Direct

Name: 28379143

Synonym: lp_2622

Alternate gene names: NA

Gene position: 2338751-2339167 (Clockwise)

Preceding gene: 28379142

Following gene: 28379144

Centisome position: 70.69

GC content: 47.96

Gene sequence:

>417_bases
ATGTTTCCAGAACGTTTAAGAGCACTACGTCGGGGGCAAAAAATGACCCTCGCTCAACTCGCGGCGGCCCTCAATCAAAT
GCCGACCGCAGACAAGACGACTCGTCAAAATACCGCGGCTCAAATCGGTAACTGGGAGCGGGACTTACGGACCCCGTCCT
ACCTAGAAGTTCGTAAATTAGCCGAATTTTTCAACGTCACGACCGATTACTTGTCAGGTAAATCAGACCAAGAAGAGTAT
GACCTCGGTCGCATCTTTTTATCGGGCAAGCCGTTGACGTTTAATCAAGAACAATTATCCAGTGAAGACCGCTATGAACT
GTTTCAGTTGATGGATGGTTACTTACATGGTCGCCAGCATCGAGTTTCAACGGATGCGACCGGCCAAGAAGAATTAGACT
TACACTTTGATGACTAG

Upstream 100 bases:

>100_bases
CACCGGCCTTCTGGCAAGCTGGTGTGGCTTTGATCAAGCGGGACATCGATGAATTCATGGCGTTATCCGCACCGTTAATC
TAAGGAATGGAAGTGAGCAC

Downstream 100 bases:

>100_bases
GAGTTTTTTATGAATCCCAAGAAGTTAAAACAATTAAAAAAGCGGGTCAAAAAGCAAGCCGGTGCCCCGTATATTCAACA
GTTAATGAAGTACCGCGACT

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcription Regulator; Cro/CI Family Transcriptional Regulator

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MFPERLRALRRGQKMTLAQLAAALNQMPTADKTTRQNTAAQIGNWERDLRTPSYLEVRKLAEFFNVTTDYLSGKSDQEEY
DLGRIFLSGKPLTFNQEQLSSEDRYELFQLMDGYLHGRQHRVSTDATGQEELDLHFDD

Sequences:

>Translated_138_residues
MFPERLRALRRGQKMTLAQLAAALNQMPTADKTTRQNTAAQIGNWERDLRTPSYLEVRKLAEFFNVTTDYLSGKSDQEEY
DLGRIFLSGKPLTFNQEQLSSEDRYELFQLMDGYLHGRQHRVSTDATGQEELDLHFDD
>Mature_138_residues
MFPERLRALRRGQKMTLAQLAAALNQMPTADKTTRQNTAAQIGNWERDLRTPSYLEVRKLAEFFNVTTDYLSGKSDQEEY
DLGRIFLSGKPLTFNQEQLSSEDRYELFQLMDGYLHGRQHRVSTDATGQEELDLHFDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16006; Mature: 16006

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPERLRALRRGQKMTLAQLAAALNQMPTADKTTRQNTAAQIGNWERDLRTPSYLEVRKL
CCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHH
AEFFNVTTDYLSGKSDQEEYDLGRIFLSGKPLTFNQEQLSSEDRYELFQLMDGYLHGRQH
HHHHHHHHHHHCCCCCCCHHHHHEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCC
RVSTDATGQEELDLHFDD
CCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MFPERLRALRRGQKMTLAQLAAALNQMPTADKTTRQNTAAQIGNWERDLRTPSYLEVRKL
CCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHH
AEFFNVTTDYLSGKSDQEEYDLGRIFLSGKPLTFNQEQLSSEDRYELFQLMDGYLHGRQH
HHHHHHHHHHHCCCCCCCHHHHHEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCC
RVSTDATGQEELDLHFDD
CCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA