Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28379115

Identifier: 28379115

GI number: 28379115

Start: 2304934

End: 2305698

Strand: Direct

Name: 28379115

Synonym: lp_2586

Alternate gene names: NA

Gene position: 2304934-2305698 (Clockwise)

Preceding gene: 28379112

Following gene: 28379116

Centisome position: 69.67

GC content: 49.54

Gene sequence:

>765_bases
GTGATGCGACGAATTAAAATTATTAAAATCATGGCCATTATTAGTGCGACCCTGGTCGTAGGGATTGGATCCTATTGGCA
ACATCGCTTGACCCCATTACGAAAAACGCGGGTCGCCCAAACGAGTATTCCGACCATCTTCGTCGGTGGCGATTACGCGC
GCGCATTTTCTACCGACGGCTTTGTGCACCGCTTAACCGCGGCACACCTGATGACGAAAGGATTGGTCGTCCATGTTAGT
CACGCCGGCCACGTGACTGTCCAACAGTTCGGACCACTAAAAAACAACCCAACGATTCAGGTTATCTTTGCCGATAATCA
TCATGCGAAACGTCAAGCTCGGCAGTTTGCTACTGTCATGCAAGGGCTCGCAAAACGCTACCACGTGACCCGCTACAATG
CTGTCGGTCACTCATCTGGAGGTAATATCATCTTTGATTATCTGACAGCGCAAGTCCCCCAGCGCGCACAAATCAATAAG
TTTGTGACCATTGGCTCGACCTATCCGGGCTTGACCACTCAGCAGTTAAACCGGTTACCACGGTCCTTGCCGATATTGAA
TATTGCCGGCCATGTTTGGCATACAAGTGGTGATGGCGGCGTCAATTTACAAGCCGTACTTAAATTCAGCCATCAATTAT
TGGCAGCTGGTTGGTCACCAAAAACCCAAATCATTCACGGTAGTCCCCTGACCGCCAGCCACTCAATGTTGCATATCAAT
CCACAGGTCGACTTACTCATCATCCAGTTCTTGTACGGCAACTGA

Upstream 100 bases:

>100_bases
TGTAGACTTATTGCTTCTCATTCTAGTGGATTCGGCGAAGGTTTGCAAAAGCAATTTTTACTAATTCGACTATAATAGGA
TTCAAAGGCGAGGTGGATCA

Downstream 100 bases:

>100_bases
TCAATTCATCGAGGCGTGCTGCCAATCAACCTGAAGCACGCCACACTTCTAATTTAACAGGATTCGGACACCCTTACGTC
CCTTGGATGGGATGGCAAAT

Product: cell surface hydrolase, membrane-bound (putative)

Products: NA

Alternate protein names: Cell Surface Hydrolase Membrane-Bound; Lipase/Esterase; Secreted Protein

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDGFVHRLTAAHLMTKGLVVHVS
HAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVMQGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINK
FVTIGSTYPGLTTQQLNRLPRSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN
PQVDLLIIQFLYGN

Sequences:

>Translated_254_residues
MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDGFVHRLTAAHLMTKGLVVHVS
HAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVMQGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINK
FVTIGSTYPGLTTQQLNRLPRSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN
PQVDLLIIQFLYGN
>Mature_254_residues
MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDGFVHRLTAAHLMTKGLVVHVS
HAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVMQGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINK
FVTIGSTYPGLTTQQLNRLPRSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN
PQVDLLIIQFLYGN

Specific function: Unknown

COG id: COG4814

COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28055; Mature: 28055

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCHHHHCCCC
FVHRLTAAHLMTKGLVVHVSHAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVM
HHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
QGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINKFVTIGSTYPGLTTQQLNRLP
HHHHHHHEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHCH
RSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN
HHCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEC
PQVDLLIIQFLYGN
CCEEEEEEEEECCC
>Mature Secondary Structure
MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCHHHHCCCC
FVHRLTAAHLMTKGLVVHVSHAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVM
HHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
QGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINKFVTIGSTYPGLTTQQLNRLP
HHHHHHHEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHCH
RSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN
HHCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEC
PQVDLLIIQFLYGN
CCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA