| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379014
Identifier: 28379014
GI number: 28379014
Start: 2197887
End: 2198948
Strand: Direct
Name: 28379014
Synonym: lp_2451
Alternate gene names: NA
Gene position: 2197887-2198948 (Clockwise)
Preceding gene: 28379013
Following gene: 28379015
Centisome position: 66.44
GC content: 32.96
Gene sequence:
>1062_bases ATGGAAAAAAGTGAATTTGAAAATAAAATAAATGGTTTATCAAAAAAAGTCGACAGTATGAGCGAGATGTTAAAAACTGA AGAAGCTACCAAAAATGCTCTAGTAATGCCTTTCTTTGCAGCCTTAAATTACAATGTTTTTGATCCTACTGAATTTGTTC CTGAATATACTGCCGATTTTGGTAGCAAAAAAGGAGAACGTGTCGATTACGCCGTTGTGATAAATGGCGAAGTTCAAATA CTAGTAGAGACTAAAGAACTATCAGATGATTTAAATAAGCGGGATTCCCAGCTTTTTAGATATTTTACTGCAACCAAGGC TAAGTTTGGTATTCTTACTAATGGTGATACATACAAATTCTATACTGATTTAGAAGAACCAAATGTTATGGATAAGACCC CCTTTCTCACAATCAAGTTATCTGATATAAAAGATACACAAATTACTGAATTGTTTAAGTTTACAAAAGACAACTTTGAC ATCGACAACATCACTGATTCAGCCTCTGACTTGAAATATGTAGGTCTAACTAAAGAATATCTAAAAAAGCAAATGAATAA TCCCGCTGACGACTTTGTCCGTCTTATTTTAGCTGAAATTTATGATGGCATGAAAACCCAGCAAGTGGTTGATCAATTCA GGCCTGTGATTAGTAAAGGTTTCACTCAGATTATTTCTGAACAAGTTAATAGCAAACTTAGTAACGCATTAAATCAAACT GTTAAAGATGCTACTGCTTCTACCGAATCGCTCAAAGATACGCCTGATCCTAAAGCAGAGATAGTCACTACACCAGATGA ATTAGAATCTTTCGCCGTAACCAAGGTCATTCTAAGAGAAACAATTGGACAAGATAGAATTGTTTATAGAGATAATCGAA GCTACTTTAATGTATTAATAGACGATAGCAATCGCAAATGGGTTTTAAGAATTTATTTTCACACAAATCGTAATTTCATT ATTTTGCATGATGATGACAATACCGAATTAGACTTTGAATCACCGGTTGATATTATGAATTATTCAGACCAAATAAAAAA AGTTGCAGAACAATTTAAATAA
Upstream 100 bases:
>100_bases ATACCAGATAGGAGGTCGACAAAAGCTAGGAGTTGGGATTGCTTACATTTTTTGAAATTAGTATGTTTTGGGGAATAACA TATTTTTGGAGGAATAACAG
Downstream 100 bases:
>100_bases CTAAAACTATAGAATTGAATTTCTATATCCAAGCCCCTCACCGGGCTTTCACGCGAGCGTAGTTCAACGGTAGAACAGTA CTCCTATGAATTGCTAACTA
Product: prophage Lp2 protein 6
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MEKSEFENKINGLSKKVDSMSEMLKTEEATKNALVMPFFAALNYNVFDPTEFVPEYTADFGSKKGERVDYAVVINGEVQI LVETKELSDDLNKRDSQLFRYFTATKAKFGILTNGDTYKFYTDLEEPNVMDKTPFLTIKLSDIKDTQITELFKFTKDNFD IDNITDSASDLKYVGLTKEYLKKQMNNPADDFVRLILAEIYDGMKTQQVVDQFRPVISKGFTQIISEQVNSKLSNALNQT VKDATASTESLKDTPDPKAEIVTTPDELESFAVTKVILRETIGQDRIVYRDNRSYFNVLIDDSNRKWVLRIYFHTNRNFI ILHDDDNTELDFESPVDIMNYSDQIKKVAEQFK
Sequences:
>Translated_353_residues MEKSEFENKINGLSKKVDSMSEMLKTEEATKNALVMPFFAALNYNVFDPTEFVPEYTADFGSKKGERVDYAVVINGEVQI LVETKELSDDLNKRDSQLFRYFTATKAKFGILTNGDTYKFYTDLEEPNVMDKTPFLTIKLSDIKDTQITELFKFTKDNFD IDNITDSASDLKYVGLTKEYLKKQMNNPADDFVRLILAEIYDGMKTQQVVDQFRPVISKGFTQIISEQVNSKLSNALNQT VKDATASTESLKDTPDPKAEIVTTPDELESFAVTKVILRETIGQDRIVYRDNRSYFNVLIDDSNRKWVLRIYFHTNRNFI ILHDDDNTELDFESPVDIMNYSDQIKKVAEQFK >Mature_353_residues MEKSEFENKINGLSKKVDSMSEMLKTEEATKNALVMPFFAALNYNVFDPTEFVPEYTADFGSKKGERVDYAVVINGEVQI LVETKELSDDLNKRDSQLFRYFTATKAKFGILTNGDTYKFYTDLEEPNVMDKTPFLTIKLSDIKDTQITELFKFTKDNFD IDNITDSASDLKYVGLTKEYLKKQMNNPADDFVRLILAEIYDGMKTQQVVDQFRPVISKGFTQIISEQVNSKLSNALNQT VKDATASTESLKDTPDPKAEIVTTPDELESFAVTKVILRETIGQDRIVYRDNRSYFNVLIDDSNRKWVLRIYFHTNRNFI ILHDDDNTELDFESPVDIMNYSDQIKKVAEQFK
Specific function: Unknown
COG id: COG4748
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40671; Mature: 40671
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSEFENKINGLSKKVDSMSEMLKTEEATKNALVMPFFAALNYNVFDPTEFVPEYTADF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHC GSKKGERVDYAVVINGEVQILVETKELSDDLNKRDSQLFRYFTATKAKFGILTNGDTYKF CCCCCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEE YTDLEEPNVMDKTPFLTIKLSDIKDTQITELFKFTKDNFDIDNITDSASDLKYVGLTKEY EECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHH LKKQMNNPADDFVRLILAEIYDGMKTQQVVDQFRPVISKGFTQIISEQVNSKLSNALNQT HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKDATASTESLKDTPDPKAEIVTTPDELESFAVTKVILRETIGQDRIVYRDNRSYFNVLI HHHHHCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEE DDSNRKWVLRIYFHTNRNFIILHDDDNTELDFESPVDIMNYSDQIKKVAEQFK ECCCCEEEEEEEEECCCEEEEEECCCCCEECCCCCHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MEKSEFENKINGLSKKVDSMSEMLKTEEATKNALVMPFFAALNYNVFDPTEFVPEYTADF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHC GSKKGERVDYAVVINGEVQILVETKELSDDLNKRDSQLFRYFTATKAKFGILTNGDTYKF CCCCCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEE YTDLEEPNVMDKTPFLTIKLSDIKDTQITELFKFTKDNFDIDNITDSASDLKYVGLTKEY EECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHH LKKQMNNPADDFVRLILAEIYDGMKTQQVVDQFRPVISKGFTQIISEQVNSKLSNALNQT HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKDATASTESLKDTPDPKAEIVTTPDELESFAVTKVILRETIGQDRIVYRDNRSYFNVLI HHHHHCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEE DDSNRKWVLRIYFHTNRNFIILHDDDNTELDFESPVDIMNYSDQIKKVAEQFK ECCCCEEEEEEEEECCCEEEEEECCCCCEECCCCCHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA