| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379015
Identifier: 28379015
GI number: 28379015
Start: 2199112
End: 2199288
Strand: Direct
Name: 28379015
Synonym: lp_2452
Alternate gene names: NA
Gene position: 2199112-2199288 (Clockwise)
Preceding gene: 28379014
Following gene: 28379016
Centisome position: 66.47
GC content: 31.07
Gene sequence:
>177_bases ATGGATAGTGAAATTTCAAAATACGAGCTAATTGCCACGATGAAGAAAGATATACAGACATTTATGGACTCAGAATCCAT GTTATATCTAAAAAAAGATTCATATTCAACAGAAGAATATGACCGTATGCTTACAGAAGTAAAAGATGCATTGAAAACAC GGCTATTGCAAAAATAA
Upstream 100 bases:
>100_bases TCAACGGTAGAACAGTACTCCTATGAATTGCTAACTAGATACTTTCAGATGCAGGTTCGACTCCTGCCGCTCGCTTTAAC CAGAAAGAAGGCTTAATGCT
Downstream 100 bases:
>100_bases TTATGAACTCAGTAAATGATAGTCAGCCCTAGCTGACTTCACGCGAGTGTAGTTCAACGGTAGAATGGTTCCTTTAATTC AAATATAGCCTACCTTCCAA
Product: prophage Lp2 protein 5
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MDSEISKYELIATMKKDIQTFMDSESMLYLKKDSYSTEEYDRMLTEVKDALKTRLLQK
Sequences:
>Translated_58_residues MDSEISKYELIATMKKDIQTFMDSESMLYLKKDSYSTEEYDRMLTEVKDALKTRLLQK >Mature_58_residues MDSEISKYELIATMKKDIQTFMDSESMLYLKKDSYSTEEYDRMLTEVKDALKTRLLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6934; Mature: 6934
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSEISKYELIATMKKDIQTFMDSESMLYLKKDSYSTEEYDRMLTEVKDALKTRLLQK CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDSEISKYELIATMKKDIQTFMDSESMLYLKKDSYSTEEYDRMLTEVKDALKTRLLQK CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA