Click here to switch to the map view.

The map label for this gene is 28378439

Identifier: 28378439

GI number: 28378439

Start: 1598184

End: 1598591

Strand: Direct

Name: 28378439

Synonym: lp_1762

Alternate gene names: NA

Gene position: 1598184-1598591 (Clockwise)

Preceding gene: 28378437

Following gene: 28378440

Centisome position: 48.31

GC content: 45.1

Gene sequence:

>408_bases
ATGACCGAAATCGAAACGGCACTACTTCGGGACCGAAAAGCAAAAGTCCAGCAATATTTTGCGATGTGGGTCACTCGTGA
TTTTGAAGCGTTACCAAGAATATTTGCGGTCGATTGTTATTATCAAGAATGCTATGGACCAGCATATCTATCATTAGCGG
AAGTTCAAGCCTGGATTGAACATCAATTAAGAGTTCAACGGGTAACGGCTTGGTCGATTCAGCGGTTGTGGTCAGCAACT
GACAACATGATCTTTGCCCAGTGGTCCTTCACCGCTGTTACCGACCGGATAACTCAGTTTGATGGGCTTTCAGCAGTTCA
TTTTAATTTAGCAGGACGTATCGACGATTTACGAGAGTATCAGACCACGACTGCGCATGATTATCCCTATCATGGATCCG
TGCTGTGA

Upstream 100 bases:

>100_bases
TCTTGTTAATTGTTAGTGATGTTAAAATAATGGTAATCGCCTGTTTATTAACTAGAATTACGGCCTTTAAAAAGTAATCT
TAAAACGGAAGGTGTTTTAA

Downstream 100 bases:

>100_bases
TATGCGAAGCATGTGTGTCATAATGTAAGCGAAATCATTTGGAGTGTTGGGGGAATCAGTATGCAAGTTCAAGTTTCTGT
TATTGTGGCTGCGTATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTEIETALLRDRKAKVQQYFAMWVTRDFEALPRIFAVDCYYQECYGPAYLSLAEVQAWIEHQLRVQRVTAWSIQRLWSAT
DNMIFAQWSFTAVTDRITQFDGLSAVHFNLAGRIDDLREYQTTTAHDYPYHGSVL

Sequences:

>Translated_135_residues
MTEIETALLRDRKAKVQQYFAMWVTRDFEALPRIFAVDCYYQECYGPAYLSLAEVQAWIEHQLRVQRVTAWSIQRLWSAT
DNMIFAQWSFTAVTDRITQFDGLSAVHFNLAGRIDDLREYQTTTAHDYPYHGSVL
>Mature_134_residues
TEIETALLRDRKAKVQQYFAMWVTRDFEALPRIFAVDCYYQECYGPAYLSLAEVQAWIEHQLRVQRVTAWSIQRLWSATD
NMIFAQWSFTAVTDRITQFDGLSAVHFNLAGRIDDLREYQTTTAHDYPYHGSVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15850; Mature: 15719

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIETALLRDRKAKVQQYFAMWVTRDFEALPRIFAVDCYYQECYGPAYLSLAEVQAWIE
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HQLRVQRVTAWSIQRLWSATDNMIFAQWSFTAVTDRITQFDGLSAVHFNLAGRIDDLREY
HHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
QTTTAHDYPYHGSVL
HCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEIETALLRDRKAKVQQYFAMWVTRDFEALPRIFAVDCYYQECYGPAYLSLAEVQAWIE
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HQLRVQRVTAWSIQRLWSATDNMIFAQWSFTAVTDRITQFDGLSAVHFNLAGRIDDLREY
HHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
QTTTAHDYPYHGSVL
HCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA