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The map label for this gene is 28378433

Identifier: 28378433

GI number: 28378433

Start: 1592456

End: 1593025

Strand: Direct

Name: 28378433

Synonym: lp_1753

Alternate gene names: NA

Gene position: 1592456-1593025 (Clockwise)

Preceding gene: 28378427

Following gene: 28378434

Centisome position: 48.14

GC content: 41.23

Gene sequence:

>570_bases
ATGAGCCGGTTGTGGCTTAGTGGTTACCGGAGTTACGAGTTGAATGTCTTTGGTGATCAGGATGATAAACTAAAAGTTAT
TAAGTTTGCGTTAACTAATTACTTAACGACGCAGATCGAGGATGGTATGGATTGGCTGATAACGGGTGGTCAGCTCGGTA
TTGAACAGTGGACAGCGGAAGTAGGGTTAACGCTCAAAAAGACATATCCAGAATTGAAAGTGGCAATGATGTTACCATAT
GGTGAATTTGGTGGGCGCTGGAATGAAAATAACCAAGCTAAATTACAGACTTTGCTGGCCCAAGTCGATTTTCATGCACC
AGTCAGTAAACAACCGTATGAAAATCCGCAACAATTAAAAAATTACCAAGAATTTATGGTTACCCATACGGATGCGGCCA
CTCTGGTATATGATCCAGATAACCCCGGGAAACCCACGTATGACTATGATTTGATTCGGAACTTTAGTGACACTCATCCG
TACCCATTGACCCTGATCGACTTCGACTGGTTACAGGAAAGTGCCAATGAATATGCAGAAAAACAGAATAATGGTTTTAA
TTTTGAATAA

Upstream 100 bases:

>100_bases
TAATAATGTTACATTTTACCATTAACTAATAGGGAATGTGAAATATCTGTGAGTTTTTAACTGATTTAGACCGATTTAGT
GACAGAAAGGAGACTTTTTT

Downstream 100 bases:

>100_bases
AGTCTGCTACAATGTTTTAAGTAATGCGGATGCCGAATGGGTATCGCGCGAATAACAATGAGGTGTTTTTAAATATGGCT
AAACGTAATTTTACTCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSRLWLSGYRSYELNVFGDQDDKLKVIKFALTNYLTTQIEDGMDWLITGGQLGIEQWTAEVGLTLKKTYPELKVAMMLPY
GEFGGRWNENNQAKLQTLLAQVDFHAPVSKQPYENPQQLKNYQEFMVTHTDAATLVYDPDNPGKPTYDYDLIRNFSDTHP
YPLTLIDFDWLQESANEYAEKQNNGFNFE

Sequences:

>Translated_189_residues
MSRLWLSGYRSYELNVFGDQDDKLKVIKFALTNYLTTQIEDGMDWLITGGQLGIEQWTAEVGLTLKKTYPELKVAMMLPY
GEFGGRWNENNQAKLQTLLAQVDFHAPVSKQPYENPQQLKNYQEFMVTHTDAATLVYDPDNPGKPTYDYDLIRNFSDTHP
YPLTLIDFDWLQESANEYAEKQNNGFNFE
>Mature_188_residues
SRLWLSGYRSYELNVFGDQDDKLKVIKFALTNYLTTQIEDGMDWLITGGQLGIEQWTAEVGLTLKKTYPELKVAMMLPYG
EFGGRWNENNQAKLQTLLAQVDFHAPVSKQPYENPQQLKNYQEFMVTHTDAATLVYDPDNPGKPTYDYDLIRNFSDTHPY
PLTLIDFDWLQESANEYAEKQNNGFNFE

Specific function: Unknown

COG id: COG4474

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0398 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1753_LACPL (Q88W96)

Other databases:

- EMBL:   AL935257
- RefSeq:   NP_785325.1
- ProteinModelPortal:   Q88W96
- SMR:   Q88W96
- GeneID:   1062159
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_1753
- NMPDR:   fig|220668.1.peg.1459
- HOGENOM:   HBG338123
- OMA:   LWVTGYR
- ProtClustDB:   PRK13660
- BioCyc:   LPLA220668:LP_1753-MONOMER
- HAMAP:   MF_01575
- InterPro:   IPR010697
- PIRSF:   PIRSF021290

Pfam domain/function: PF06908 DUF1273

EC number: NA

Molecular weight: Translated: 21926; Mature: 21794

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLWLSGYRSYELNVFGDQDDKLKVIKFALTNYLTTQIEDGMDWLITGGQLGIEQWTAE
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCEECHHHHHHH
VGLTLKKTYPELKVAMMLPYGEFGGRWNENNQAKLQTLLAQVDFHAPVSKQPYENPQQLK
HCEEEECCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
NYQEFMVTHTDAATLVYDPDNPGKPTYDYDLIRNFSDTHPYPLTLIDFDWLQESANEYAE
HHHHHHEEECCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHH
KQNNGFNFE
HCCCCCCCC
>Mature Secondary Structure 
SRLWLSGYRSYELNVFGDQDDKLKVIKFALTNYLTTQIEDGMDWLITGGQLGIEQWTAE
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCEECHHHHHHH
VGLTLKKTYPELKVAMMLPYGEFGGRWNENNQAKLQTLLAQVDFHAPVSKQPYENPQQLK
HCEEEECCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
NYQEFMVTHTDAATLVYDPDNPGKPTYDYDLIRNFSDTHPYPLTLIDFDWLQESANEYAE
HHHHHHEEECCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHH
KQNNGFNFE
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566