| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is gpsB
Identifier: 28378434
GI number: 28378434
Start: 1593100
End: 1593441
Strand: Direct
Name: gpsB
Synonym: lp_1754
Alternate gene names: 28378434
Gene position: 1593100-1593441 (Clockwise)
Preceding gene: 28378433
Following gene: 28378435
Centisome position: 48.16
GC content: 41.23
Gene sequence:
>342_bases ATGGCTAAACGTAATTTTACTCCCAAAGACATCCTTCAAAAAGAGTTTAAGCCAAAGATGCGGGGTTATGATCCTGCCGA CGTGGACGGCTTCTTAGATAATGTCATTAAGGACTATGAGTCATTTACTAAAGATAACCAACAACTTTCAGATGAAAATG AACGGTTACGGGCCAAGGTTGACGAGCTTACCAAGCAAGTCGCTGTCGGTGCAACCAGTCCATCTTCTCAACCGACTAGT ACGGTGACGAATATGGATATTCTGAAACGTTTGTCTAACTTGGAACGTCATGTCTTTGGTGCCCAATTAGATAATAATCA AAATGAATCACACCGTCTATAA
Upstream 100 bases:
>100_bases AGAATAATGGTTTTAATTTTGAATAAAGTCTGCTACAATGTTTTAAGTAATGCGGATGCCGAATGGGTATCGCGCGAATA ACAATGAGGTGTTTTTAAAT
Downstream 100 bases:
>100_bases TTGTGATTCGATGTAAATTCTGGGTAATCGCGGTCGGCTTATGTCGGCTGAGGAAGGTCCATGCTCGCACAAGCTGCGAT GCTTGTAGTGTTCGTGCTCG
Product: cell division protein GpsB
Products: NA
Alternate protein names: Guiding PBP1-shuttling protein
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAKRNFTPKDILQKEFKPKMRGYDPADVDGFLDNVIKDYESFTKDNQQLSDENERLRAKVDELTKQVAVGATSPSSQPTS TVTNMDILKRLSNLERHVFGAQLDNNQNESHRL
Sequences:
>Translated_113_residues MAKRNFTPKDILQKEFKPKMRGYDPADVDGFLDNVIKDYESFTKDNQQLSDENERLRAKVDELTKQVAVGATSPSSQPTS TVTNMDILKRLSNLERHVFGAQLDNNQNESHRL >Mature_112_residues AKRNFTPKDILQKEFKPKMRGYDPADVDGFLDNVIKDYESFTKDNQQLSDENERLRAKVDELTKQVAVGATSPSSQPTST VTNMDILKRLSNLERHVFGAQLDNNQNESHRL
Specific function: Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on divIC and PBP2B for its recruitment to the divisome. Together with ezrA, is a key component of the system that regulates PBP1 localiz
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasm. Note=Shuttles between the lateral wall and the division site in a cell cycle- dependent manner (By similarity)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gpsB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPSB_LACPL (Q88W95)
Other databases:
- EMBL: AL935257 - RefSeq: NP_785326.1 - GeneID: 1064097 - GenomeReviews: AL935263_GR - KEGG: lpl:lp_1754 - NMPDR: fig|220668.1.peg.1460 - HOGENOM: HBG313508 - OMA: SATNMDI - ProtClustDB: PRK14127 - BioCyc: LPLA220668:LP_1754-MONOMER - GO: GO:0005737 - HAMAP: MF_02011 - InterPro: IPR011229 - InterPro: IPR007793 - InterPro: IPR019933 - PIRSF: PIRSF029938 - TIGRFAMs: TIGR03544
Pfam domain/function: PF05103 DivIVA
EC number: NA
Molecular weight: Translated: 12927; Mature: 12795
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRNFTPKDILQKEFKPKMRGYDPADVDGFLDNVIKDYESFTKDNQQLSDENERLRAKV CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DELTKQVAVGATSPSSQPTSTVTNMDILKRLSNLERHVFGAQLDNNQNESHRL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AKRNFTPKDILQKEFKPKMRGYDPADVDGFLDNVIKDYESFTKDNQQLSDENERLRAKV CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DELTKQVAVGATSPSSQPTSTVTNMDILKRLSNLERHVFGAQLDNNQNESHRL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566