| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
Click here to switch to the map view.
The map label for this gene is yxeP [H]
Identifier: 28378355
GI number: 28378355
Start: 1517037
End: 1518170
Strand: Direct
Name: yxeP [H]
Synonym: lp_1664
Alternate gene names: 28378355
Gene position: 1517037-1518170 (Clockwise)
Preceding gene: 28378354
Following gene: 28378356
Centisome position: 45.86
GC content: 48.5
Gene sequence:
>1134_bases ATGATGACAACAACTTTAGCAGCTTGGATGACAACCTTGCGCCATCAATTACACGCACACCCAGAGTTAGCACTACAGGA AGTCGCGACGACCGCTTTAATTAAGCAAACATTGACTGAGTTGAACATTCGGTTGGTAGACTATCCGGGAGAAACTGGGG TGGTGGCCGAGATTGGGCATGGTGCGCCAATCATCGCGTTGCGCGCGGATATTGATGCACTCCCAATCCAAGAAGACAAT GAGTTATCCTTTAGATCAACGATTCCTGGTCGGATGCACGCTTGTGGGCATGATTTTCACACGGCCGCCTTATTAGGGGG AGCGCGATTATTGAAAGTGCATGAGGCAGATCTCAATGGTACGGTGCGACTGATCTTTCAGCCTGCGGAGGAAGGACACC GCGGTGCCAAAATGATGATTGATAATGGTGTTCTAGCAGGTGTTCGTGCGATTGCGGGATTCCATAATATGCCGAATTTA CCAGTCGGCACTTTAGCGATGAAGTCTGGACCACTCATGGCTAGTAATGATAATTTTGACGTCACAATTTTGGGCCAGGG CGCCCATGCAGCGATGCCCGAAGCAAGTCATGATCCCATCGTGACGCTTGGTGAATTGATCAGTAATTTACAGACCATTC GTAGCCGAAATATTGCGCCAGACGCAGCACTGGTGCTAACGATTGCTGCCGTCCAAGCGGGAACGACTTTTAACGTGATT CCAAATACGGCGAATTTACGAGGCACGATTCGGACCTTCAACACGGCTAACCGGGATCTAGCTAAAGTACGTTTTTACGA TATTGTGCGTGCAACTGCCAAGATGAATCAGCAAACCGCTACAATTGATTGGGACCGAGGACCAAGCTGTGTCAACAATA ACGCGGCACTTACCGCTGTACTATCACGTGTTCTGAAAGATGATTTTGATATTGTGCCTGCCCAGCTATGCAATGCCGAC GATGATTTTGCGTTATATCAAGAATGTATTCCAGGATTCTATGGATTCTTAGGTTCAGGCGGCAATGGGACCTTACATCA ATCAAATTACCGCTGTGATGACGCAGGCCTAACCTATGGCGCTCGCTTCCATGAATTGGCAGCTACGGCACTATTAAAGT GGGTTCGAGCTTGA
Upstream 100 bases:
>100_bases GATGTTACCTAAAATGTTAGTGGGCGGTTTTGCAACCGTCTCAGTGGCGTCAGTGATTATTGCGTCAATCTTCTTGAAAA TTTTATAGGGGGCTTTTCAG
Downstream 100 bases:
>100_bases ATTGAAAGTGGTCAATCGACAAAGGGAAGACGCCCGACCTTGCTAGGAAACTAACATGGTTGGGCGCATTTTTTATGGAA AGCTTCTGAATGATAAGTAA
Product: aminohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MMTTTLAAWMTTLRHQLHAHPELALQEVATTALIKQTLTELNIRLVDYPGETGVVAEIGHGAPIIALRADIDALPIQEDN ELSFRSTIPGRMHACGHDFHTAALLGGARLLKVHEADLNGTVRLIFQPAEEGHRGAKMMIDNGVLAGVRAIAGFHNMPNL PVGTLAMKSGPLMASNDNFDVTILGQGAHAAMPEASHDPIVTLGELISNLQTIRSRNIAPDAALVLTIAAVQAGTTFNVI PNTANLRGTIRTFNTANRDLAKVRFYDIVRATAKMNQQTATIDWDRGPSCVNNNAALTAVLSRVLKDDFDIVPAQLCNAD DDFALYQECIPGFYGFLGSGGNGTLHQSNYRCDDAGLTYGARFHELAATALLKWVRA
Sequences:
>Translated_377_residues MMTTTLAAWMTTLRHQLHAHPELALQEVATTALIKQTLTELNIRLVDYPGETGVVAEIGHGAPIIALRADIDALPIQEDN ELSFRSTIPGRMHACGHDFHTAALLGGARLLKVHEADLNGTVRLIFQPAEEGHRGAKMMIDNGVLAGVRAIAGFHNMPNL PVGTLAMKSGPLMASNDNFDVTILGQGAHAAMPEASHDPIVTLGELISNLQTIRSRNIAPDAALVLTIAAVQAGTTFNVI PNTANLRGTIRTFNTANRDLAKVRFYDIVRATAKMNQQTATIDWDRGPSCVNNNAALTAVLSRVLKDDFDIVPAQLCNAD DDFALYQECIPGFYGFLGSGGNGTLHQSNYRCDDAGLTYGARFHELAATALLKWVRA >Mature_377_residues MMTTTLAAWMTTLRHQLHAHPELALQEVATTALIKQTLTELNIRLVDYPGETGVVAEIGHGAPIIALRADIDALPIQEDN ELSFRSTIPGRMHACGHDFHTAALLGGARLLKVHEADLNGTVRLIFQPAEEGHRGAKMMIDNGVLAGVRAIAGFHNMPNL PVGTLAMKSGPLMASNDNFDVTILGQGAHAAMPEASHDPIVTLGELISNLQTIRSRNIAPDAALVLTIAAVQAGTTFNVI PNTANLRGTIRTFNTANRDLAKVRFYDIVRATAKMNQQTATIDWDRGPSCVNNNAALTAVLSRVLKDDFDIVPAQLCNAD DDFALYQECIPGFYGFLGSGGNGTLHQSNYRCDDAGLTYGARFHELAATALLKWVRA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=214, Percent_Identity=39.2523364485981, Blast_Score=112, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 40591; Mature: 40591
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTTLAAWMTTLRHQLHAHPELALQEVATTALIKQTLTELNIRLVDYPGETGVVAEIGH CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECC GAPIIALRADIDALPIQEDNELSFRSTIPGRMHACGHDFHTAALLGGARLLKVHEADLNG CCCEEEEECCCCCCCCCCCCCCCEECCCCCHHHHCCCCHHHHHHHCCCEEEEEEECCCCC TVRLIFQPAEEGHRGAKMMIDNGVLAGVRAIAGFHNMPNLPVGTLAMKSGPLMASNDNFD EEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCEE VTILGQGAHAAMPEASHDPIVTLGELISNLQTIRSRNIAPDAALVLTIAAVQAGTTFNVI EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEC PNTANLRGTIRTFNTANRDLAKVRFYDIVRATAKMNQQTATIDWDRGPSCVNNNAALTAV CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH LSRVLKDDFDIVPAQLCNADDDFALYQECIPGFYGFLGSGGNGTLHQSNYRCDDAGLTYG HHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCCC ARFHELAATALLKWVRA HHHHHHHHHHHHHHHCC >Mature Secondary Structure MMTTTLAAWMTTLRHQLHAHPELALQEVATTALIKQTLTELNIRLVDYPGETGVVAEIGH CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECC GAPIIALRADIDALPIQEDNELSFRSTIPGRMHACGHDFHTAALLGGARLLKVHEADLNG CCCEEEEECCCCCCCCCCCCCCCEECCCCCHHHHCCCCHHHHHHHCCCEEEEEEECCCCC TVRLIFQPAEEGHRGAKMMIDNGVLAGVRAIAGFHNMPNLPVGTLAMKSGPLMASNDNFD EEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCEE VTILGQGAHAAMPEASHDPIVTLGELISNLQTIRSRNIAPDAALVLTIAAVQAGTTFNVI EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEC PNTANLRGTIRTFNTANRDLAKVRFYDIVRATAKMNQQTATIDWDRGPSCVNNNAALTAV CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH LSRVLKDDFDIVPAQLCNADDDFALYQECIPGFYGFLGSGGNGTLHQSNYRCDDAGLTYG HHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCCC ARFHELAATALLKWVRA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]