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The map label for this gene is 28378259

Identifier: 28378259

GI number: 28378259

Start: 1418897

End: 1419475

Strand: Direct

Name: 28378259

Synonym: lp_1552

Alternate gene names: NA

Gene position: 1418897-1419475 (Clockwise)

Preceding gene: 28378256

Following gene: 28378262

Centisome position: 42.89

GC content: 42.31

Gene sequence:

>579_bases
ATGATTCCAGAAAAATGGCAACAGACGCTTGGGGTTAAATTGTTTATCATGGTAAATTTAATCAATTTGGTCATCTTAGC
AGTGATCAAACTGGCCAGTGGTGCGCCCGTGTGGCGAGTTCGTAATGCACCGTTGGCCGTGGTTGGTGGGTTATTTTTAA
TTGGGATTAGTTTAATTTTGATCTGTAAACAGAATCCCAACTGGCGCAAGGGAACGTATCTCGGTGCTGATATTAACTTG
ACCGTTTTATTTTATTTGTTACTTATTGATTTCAACCGGATTTCCACGCTTGGCTTTGCGCTGATTGCGATAATCATCTC
GATTGTCGCATTACCGATGGCATATACTTCTCGTAATCGCTTGGTTGGAATCCGGATTCCGTGGACCTATTTGTCAGAAG
AAAACTGGCATCGGACTAACGTGCTAGCAGGCAGATTATTTGGAATCTCAGGACCGCTGTTAGTAGCGATGGGAAAGATG
TCAACAGACTCATTTCTCAATGCCTTTGTTACGATTATCGTGTTGGTCGTGATTTTGACCGTGGGTTATTCCTACCGGTT
AAGTAAGAAATTAATCTGA

Upstream 100 bases:

>100_bases
GTGTTTTAGTCACGCATCACGCATAACGTCGGACTCGGTATTAGAATAATTATGGTGCTGCAATCTCATTGGGTTAGCAG
TTTAAAATGGGGGCTTACTC

Downstream 100 bases:

>100_bases
TCGGGCCTGGCAGCGTTAATTGGCATCCCGTGGTAATGTTTGCAAAATCAGTTAAGGTGACGGCTGTGTGCCGGTTAGGT
GCAACGTAAAAAGCACCGCC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MIPEKWQQTLGVKLFIMVNLINLVILAVIKLASGAPVWRVRNAPLAVVGGLFLIGISLILICKQNPNWRKGTYLGADINL
TVLFYLLLIDFNRISTLGFALIAIIISIVALPMAYTSRNRLVGIRIPWTYLSEENWHRTNVLAGRLFGISGPLLVAMGKM
STDSFLNAFVTIIVLVVILTVGYSYRLSKKLI

Sequences:

>Translated_192_residues
MIPEKWQQTLGVKLFIMVNLINLVILAVIKLASGAPVWRVRNAPLAVVGGLFLIGISLILICKQNPNWRKGTYLGADINL
TVLFYLLLIDFNRISTLGFALIAIIISIVALPMAYTSRNRLVGIRIPWTYLSEENWHRTNVLAGRLFGISGPLLVAMGKM
STDSFLNAFVTIIVLVVILTVGYSYRLSKKLI
>Mature_192_residues
MIPEKWQQTLGVKLFIMVNLINLVILAVIKLASGAPVWRVRNAPLAVVGGLFLIGISLILICKQNPNWRKGTYLGADINL
TVLFYLLLIDFNRISTLGFALIAIIISIVALPMAYTSRNRLVGIRIPWTYLSEENWHRTNVLAGRLFGISGPLLVAMGKM
STDSFLNAFVTIIVLVVILTVGYSYRLSKKLI

Specific function: Unknown

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21341; Mature: 21341

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPEKWQQTLGVKLFIMVNLINLVILAVIKLASGAPVWRVRNAPLAVVGGLFLIGISLIL
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHE
ICKQNPNWRKGTYLGADINLTVLFYLLLIDFNRISTLGFALIAIIISIVALPMAYTSRNR
EECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LVGIRIPWTYLSEENWHRTNVLAGRLFGISGPLLVAMGKMSTDSFLNAFVTIIVLVVILT
EEEEEECEEEECCCCCCHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHH
VGYSYRLSKKLI
CCCCHHHHCCCC
>Mature Secondary Structure
MIPEKWQQTLGVKLFIMVNLINLVILAVIKLASGAPVWRVRNAPLAVVGGLFLIGISLIL
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHE
ICKQNPNWRKGTYLGADINLTVLFYLLLIDFNRISTLGFALIAIIISIVALPMAYTSRNR
EECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LVGIRIPWTYLSEENWHRTNVLAGRLFGISGPLLVAMGKMSTDSFLNAFVTIIVLVVILT
EEEEEECEEEECCCCCCHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHH
VGYSYRLSKKLI
CCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA