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The map label for this gene is rpmI

Identifier: 28378230

GI number: 28378230

Start: 1388568

End: 1388762

Strand: Direct

Name: rpmI

Synonym: lp_1516

Alternate gene names: 28378230

Gene position: 1388568-1388762 (Clockwise)

Preceding gene: 28378229

Following gene: 28378231

Centisome position: 41.97

GC content: 41.03

Gene sequence:

>195_bases
ATGCCAAAACAAAAGACAAACCGCGCTGCTGCAAAGCGTTTCAAGGTAACTGCTAAGGGTAAGATTAAGAGCGCCAACGC
TTTTACTAGTCATCGTTTCCATGGTAAGACTAAGAAACAACGTCGCCAATTACGTGGTACGGCTATTATCGAAAAGCCAA
TGGTCAAGACATACCACAAGTTATTACAAAAATAA

Upstream 100 bases:

>100_bases
ATTTTCTACGGTCGAAGCCTATCCTAAGATGGATGGTCGGAGTATGTTCCTAGTACTAGCACCAAAAACAGATAAGTAAT
TTCTAGGAGGATTATTGATT

Downstream 100 bases:

>100_bases
TTCACAACGTTTTAGTTAAATCTAGGAGGAAATAACATGGCTCGAGTAAAAGGTGGAACTGTAACACGCAAACGTCGCAA
ACGGATTTTAAAATTAGCTA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHKLLQK

Sequences:

>Translated_64_residues
MPKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHKLLQK
>Mature_63_residues
PKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHKLLQK

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_LACPL (Q88WU7)

Other databases:

- EMBL:   AL935256
- RefSeq:   NP_785122.1
- ProteinModelPortal:   Q88WU7
- SMR:   Q88WU7
- GeneID:   1061110
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_1516
- NMPDR:   fig|220668.1.peg.1256
- HOGENOM:   HBG734125
- OMA:   MMNETTI
- ProtClustDB:   PRK00172
- BioCyc:   LPLA220668:LP_1516-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7419; Mature: 7288

Theoretical pI: Translated: 12.57; Mature: 12.57

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHK
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
LLQK
HHCC
>Mature Secondary Structure 
PKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHK
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
LLQK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566