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The map label for this gene is ugpA [H]

Identifier: 28378073

GI number: 28378073

Start: 1220078

End: 1220968

Strand: Direct

Name: ugpA [H]

Synonym: lp_1325

Alternate gene names: 28378073

Gene position: 1220078-1220968 (Clockwise)

Preceding gene: 28378072

Following gene: 28378074

Centisome position: 36.88

GC content: 45.12

Gene sequence:

>891_bases
GTGCAGACCGGCAGTTTTGAATTAAAGCGTAATGATAAATATTATGCTTGGCTATTTCTTGGGCCCTCAATACTCGCCCT
CAGTGTTTTTGTTTTCTATCCAATGTTACGCACCTTGTATCTAAGCTTTTTCTTGACTAATAGTCTTGGTGAACCAACCG
TCTTTGTTGGTTTGCAAAATTACCTTAATTTGCTGACGACTAAGAGTTATCTTGCTAGTCTGCAAGCCACTGGAATCTAT
GTCGTGGGTGTGACGGTGTTCACGTTAATTGGGGGGTTACTGTTAGCGGCCGCTGCCAATCAAAGGGTTCGGGGTATCGA
GCTATTTCGAACTATGTTTACCTCGACTATGGGAGTGTCTGTCTCGGTCTCCGCAATTTTCTGGTTATTCATGTTTAATC
CATCCGTGGGCTTGTTGAATAAGGTGGCCATCTGGATGCACTTACCGGCAATTAATTGGTTAACGGAGCCACACTGGGCC
ATGGTGGCGATTATTATGACGAGCGTTTGGATGCACCTCGGATTTACTTTTCTGATCTTTTTTGGGGCATTGCAAGTTGT
GCCTAAAACCTTATATGATGCGGCCGATGTGGCGGGGACCAGTCGGCGTTATCAGTTCATCCATATCACGTTGCCAATGA
TTTCCCCCACACTCTTCTTTGCGGCGGTGATTACGTTGATCTCAGCGTTCAAGAGTTTCGGATTGATTGACTTGATGACT
GCGGGTGGGCCTACGAACGCCACCAACTTATTAGTTTACCGTATTTATCGGGATGCCTTCGTTGATGGTAACTATGCGCT
TGCTAGCACGGAATCGATCATACTAGCAATCATTATTGCAGCGATTACGGTAATCCAATTCAAACTTTTAGCAAAGCGGG
TGCATTACTAA

Upstream 100 bases:

>100_bases
ATTGCTGAAGAGGAGGGTGTTACTAGTGATCAACTCGTTTCCGTCGATTAAGCGACGCCTTAAGCCGAAACAATCGCCAG
ATGCGCATGACCAAGCAACT

Downstream 100 bases:

>100_bases
TGGAAAATACAATGGCTACTCAAGCCCTGATTCGACATCGAATCGGTATCGGATTCCGGTACTTGTTATTAATTACATTA
ACGTTAGTCATTATTTTACC

Product: sugar ABC transporter, permease protein (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MQTGSFELKRNDKYYAWLFLGPSILALSVFVFYPMLRTLYLSFFLTNSLGEPTVFVGLQNYLNLLTTKSYLASLQATGIY
VVGVTVFTLIGGLLLAAAANQRVRGIELFRTMFTSTMGVSVSVSAIFWLFMFNPSVGLLNKVAIWMHLPAINWLTEPHWA
MVAIIMTSVWMHLGFTFLIFFGALQVVPKTLYDAADVAGTSRRYQFIHITLPMISPTLFFAAVITLISAFKSFGLIDLMT
AGGPTNATNLLVYRIYRDAFVDGNYALASTESIILAIIIAAITVIQFKLLAKRVHY

Sequences:

>Translated_296_residues
MQTGSFELKRNDKYYAWLFLGPSILALSVFVFYPMLRTLYLSFFLTNSLGEPTVFVGLQNYLNLLTTKSYLASLQATGIY
VVGVTVFTLIGGLLLAAAANQRVRGIELFRTMFTSTMGVSVSVSAIFWLFMFNPSVGLLNKVAIWMHLPAINWLTEPHWA
MVAIIMTSVWMHLGFTFLIFFGALQVVPKTLYDAADVAGTSRRYQFIHITLPMISPTLFFAAVITLISAFKSFGLIDLMT
AGGPTNATNLLVYRIYRDAFVDGNYALASTESIILAIIIAAITVIQFKLLAKRVHY
>Mature_296_residues
MQTGSFELKRNDKYYAWLFLGPSILALSVFVFYPMLRTLYLSFFLTNSLGEPTVFVGLQNYLNLLTTKSYLASLQATGIY
VVGVTVFTLIGGLLLAAAANQRVRGIELFRTMFTSTMGVSVSVSAIFWLFMFNPSVGLLNKVAIWMHLPAINWLTEPHWA
MVAIIMTSVWMHLGFTFLIFFGALQVVPKTLYDAADVAGTSRRYQFIHITLPMISPTLFFAAVITLISAFKSFGLIDLMT
AGGPTNATNLLVYRIYRDAFVDGNYALASTESIILAIIIAAITVIQFKLLAKRVHY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=31.5068493150685, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787570, Length=272, Percent_Identity=30.8823529411765, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1790465, Length=263, Percent_Identity=26.9961977186312, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32970; Mature: 32970

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGSFELKRNDKYYAWLFLGPSILALSVFVFYPMLRTLYLSFFLTNSLGEPTVFVGLQN
CCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH
YLNLLTTKSYLASLQATGIYVVGVTVFTLIGGLLLAAAANQRVRGIELFRTMFTSTMGVS
HHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE
VSVSAIFWLFMFNPSVGLLNKVAIWMHLPAINWLTEPHWAMVAIIMTSVWMHLGFTFLIF
EHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGALQVVPKTLYDAADVAGTSRRYQFIHITLPMISPTLFFAAVITLISAFKSFGLIDLMT
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AGGPTNATNLLVYRIYRDAFVDGNYALASTESIILAIIIAAITVIQFKLLAKRVHY
CCCCCCCHHHHHEEEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTGSFELKRNDKYYAWLFLGPSILALSVFVFYPMLRTLYLSFFLTNSLGEPTVFVGLQN
CCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH
YLNLLTTKSYLASLQATGIYVVGVTVFTLIGGLLLAAAANQRVRGIELFRTMFTSTMGVS
HHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE
VSVSAIFWLFMFNPSVGLLNKVAIWMHLPAINWLTEPHWAMVAIIMTSVWMHLGFTFLIF
EHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGALQVVPKTLYDAADVAGTSRRYQFIHITLPMISPTLFFAAVITLISAFKSFGLIDLMT
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AGGPTNATNLLVYRIYRDAFVDGNYALASTESIILAIIIAAITVIQFKLLAKRVHY
CCCCCCCHHHHHEEEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA