Click here to switch to the map view.

The map label for this gene is rfaG [C]

Identifier: 28378037

GI number: 28378037

Start: 1159684

End: 1160862

Strand: Direct

Name: rfaG [C]

Synonym: lp_1275

Alternate gene names: 28378037

Gene position: 1159684-1160862 (Clockwise)

Preceding gene: 28378036

Following gene: 28378038

Centisome position: 35.05

GC content: 45.46

Gene sequence:

>1179_bases
GTGAATATCGGGATATTTACAGACACATACTATCCACAAGTGAGTGGGGTCGCAACGTCAATCAAGGTGTTACGCAATCA
ACTCGAACGGGCTGGTCATCAAGTCTATATCTTTACGACCACGGATCCCCATGTTGATAAGAATATTTATGAACGCAATA
TTTTTCGGTTTACGAGTATTCCATTTGTTTCGTTCACGGATCGGCGCATCGCCGTTCGCGGGCTTTTTAAGGCTTACCAG
GTTGCTAAGGATCTTGGCCTGGATATTGTTCATACGCAGACAGAATTCTCCATGGGGATGATTGGTAAGTTTGTTGCCAA
ACAATTAAAAGTCCCATGTATCCATACGTACCACACGATGTATGAGGATTATCTACATTATATTGCGAATGGTAAGTTGT
TAAAGCCATACCACGTTAAGGAGGCCACACGGGCGTATTGTTATCATCTGAACGGGATTGTAGCACCGAGTGAGCGGGTT
GCAAATACACTGACGGGCTACGGCGTTAAAGCGCCAATTCGCATTATTCCGACTGGAATCGACATTAATCAGTACGAGCA
GCAGTCGACGGTGGATTATCGGCAAAGACTCGGCTATCAGTCTGATACGCCAGTATTACTTTCCTTGAGTCGTTTGGCCT
ACGAGAAAAACATTCACGAAGTCATTGCAGCCCTACCGGCGATCTTAGAACAGGTGCCGAATGCCCAACTCCTGATTGTA
GGTGATGGTCCGGCACGTGAAACACTGGAAAATCAGGTTCAAGACGCCGGCTTAACGGCGCACGTACAATTTACCGGTGA
AATTGATAATGATGAAGTTTATAACTATTACCAGATGGCTGACCTGTTCGTTTCGGCTTCGAACTCAGAATCACAGGGGC
TGACGTACATTGAAGCAATGGCTGCTGGCCTTAAAACGGTAGTGGCTGCTAGTCCGTACACGGATCAATTACTTGATGAT
CCGTCACTGGGGACGACCTTTACAAGTGAGACCGATCTGATCAAGGATGTTGTGCGTTATTTACAACATCCCAATACTTT
TAACGATCCCAAGCCACGGCAGAAGAAGCTTTACCAAATTTCCGCAGAGTATTTCGGCAAGCAAGTGATCAACTACTATC
AAGACGTACAGCTGGCGTATTCTGAATCAGCGGATAAATCGGCGAATATTAGTAATTAA

Upstream 100 bases:

>100_bases
TAAGTCGAATTCGTGATGATCATGAAATAATGATCTAAGCGCGGTTAAGCAACATCGATTAGCAGCACGGTTAATTGATG
GAAATAAGGGGAGAATCTAC

Downstream 100 bases:

>100_bases
CGTGTGTCAAATCGTCGAATGAGCACCGCCAAAACGGGGATGCTTATTCGACGTATGACGCGTAAGGGGACGAATTATGT
TAGACATTACCATGTTTTCA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MNIGIFTDTYYPQVSGVATSIKVLRNQLERAGHQVYIFTTTDPHVDKNIYERNIFRFTSIPFVSFTDRRIAVRGLFKAYQ
VAKDLGLDIVHTQTEFSMGMIGKFVAKQLKVPCIHTYHTMYEDYLHYIANGKLLKPYHVKEATRAYCYHLNGIVAPSERV
ANTLTGYGVKAPIRIIPTGIDINQYEQQSTVDYRQRLGYQSDTPVLLSLSRLAYEKNIHEVIAALPAILEQVPNAQLLIV
GDGPARETLENQVQDAGLTAHVQFTGEIDNDEVYNYYQMADLFVSASNSESQGLTYIEAMAAGLKTVVAASPYTDQLLDD
PSLGTTFTSETDLIKDVVRYLQHPNTFNDPKPRQKKLYQISAEYFGKQVINYYQDVQLAYSESADKSANISN

Sequences:

>Translated_392_residues
MNIGIFTDTYYPQVSGVATSIKVLRNQLERAGHQVYIFTTTDPHVDKNIYERNIFRFTSIPFVSFTDRRIAVRGLFKAYQ
VAKDLGLDIVHTQTEFSMGMIGKFVAKQLKVPCIHTYHTMYEDYLHYIANGKLLKPYHVKEATRAYCYHLNGIVAPSERV
ANTLTGYGVKAPIRIIPTGIDINQYEQQSTVDYRQRLGYQSDTPVLLSLSRLAYEKNIHEVIAALPAILEQVPNAQLLIV
GDGPARETLENQVQDAGLTAHVQFTGEIDNDEVYNYYQMADLFVSASNSESQGLTYIEAMAAGLKTVVAASPYTDQLLDD
PSLGTTFTSETDLIKDVVRYLQHPNTFNDPKPRQKKLYQISAEYFGKQVINYYQDVQLAYSESADKSANISN
>Mature_392_residues
MNIGIFTDTYYPQVSGVATSIKVLRNQLERAGHQVYIFTTTDPHVDKNIYERNIFRFTSIPFVSFTDRRIAVRGLFKAYQ
VAKDLGLDIVHTQTEFSMGMIGKFVAKQLKVPCIHTYHTMYEDYLHYIANGKLLKPYHVKEATRAYCYHLNGIVAPSERV
ANTLTGYGVKAPIRIIPTGIDINQYEQQSTVDYRQRLGYQSDTPVLLSLSRLAYEKNIHEVIAALPAILEQVPNAQLLIV
GDGPARETLENQVQDAGLTAHVQFTGEIDNDEVYNYYQMADLFVSASNSESQGLTYIEAMAAGLKTVVAASPYTDQLLDD
PSLGTTFTSETDLIKDVVRYLQHPNTFNDPKPRQKKLYQISAEYFGKQVINYYQDVQLAYSESADKSANISN

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=314, Percent_Identity=24.203821656051, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24654571, Length=313, Percent_Identity=23.0031948881789, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 44219; Mature: 44219

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGIFTDTYYPQVSGVATSIKVLRNQLERAGHQVYIFTTTDPHVDKNIYERNIFRFTSI
CCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHEEEECC
PFVSFTDRRIAVRGLFKAYQVAKDLGLDIVHTQTEFSMGMIGKFVAKQLKVPCIHTYHTM
CEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHH
YEDYLHYIANGKLLKPYHVKEATRAYCYHLNGIVAPSERVANTLTGYGVKAPIRIIPTGI
HHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCC
DINQYEQQSTVDYRQRLGYQSDTPVLLSLSRLAYEKNIHEVIAALPAILEQVPNAQLLIV
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GDGPARETLENQVQDAGLTAHVQFTGEIDNDEVYNYYQMADLFVSASNSESQGLTYIEAM
CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHH
AAGLKTVVAASPYTDQLLDDPSLGTTFTSETDLIKDVVRYLQHPNTFNDPKPRQKKLYQI
HHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
SAEYFGKQVINYYQDVQLAYSESADKSANISN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNIGIFTDTYYPQVSGVATSIKVLRNQLERAGHQVYIFTTTDPHVDKNIYERNIFRFTSI
CCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHEEEECC
PFVSFTDRRIAVRGLFKAYQVAKDLGLDIVHTQTEFSMGMIGKFVAKQLKVPCIHTYHTM
CEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHH
YEDYLHYIANGKLLKPYHVKEATRAYCYHLNGIVAPSERVANTLTGYGVKAPIRIIPTGI
HHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCC
DINQYEQQSTVDYRQRLGYQSDTPVLLSLSRLAYEKNIHEVIAALPAILEQVPNAQLLIV
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GDGPARETLENQVQDAGLTAHVQFTGEIDNDEVYNYYQMADLFVSASNSESQGLTYIEAM
CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHH
AAGLKTVVAASPYTDQLLDDPSLGTTFTSETDLIKDVVRYLQHPNTFNDPKPRQKKLYQI
HHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
SAEYFGKQVINYYQDVQLAYSESADKSANISN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]