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The map label for this gene is 28378010

Identifier: 28378010

GI number: 28378010

Start: 1127706

End: 1128254

Strand: Direct

Name: 28378010

Synonym: lp_1241

Alternate gene names: NA

Gene position: 1127706-1128254 (Clockwise)

Preceding gene: 28378009

Following gene: 28378012

Centisome position: 34.09

GC content: 43.72

Gene sequence:

>549_bases
ATGGCGCGCGAGGCTAAAGGACCTAAGGAAGGCGACTTCATTACGATCAAAAGCTATAAGCACGACGGAAGTTTACATCG
AACTTGGCGCGATACAATGGTACTCAAAACAAGCGAGAACGTACTAATTGGTTGTAACGATCACACACTAGTCACCGAGG
ATGATGGTCGCCGGTGGGTGACGCGGGAACCTGCAATCGTTTATTTTCATAAGCATTATTGGTTTAATATCGTGGCGATG
ATTCGCGATAACGGCGTTTCATACTATTGCAACTTAGCATCACCATACGTGTTAGATAAAGAGGCTTTGAAGTACATCGA
CTATGATCTGGATGTCAAAGTCTTTCCCGATGGTGAGCGGCGGTTGTTGGATGTTGATGAGTACGAAGAACACGGTGCCC
AATGGCGTTATTCGGCTGATACTGATCGCATTTTAAAAGCAAATGTGAAAGTCTTAGTTGATTGGATCAAAAACAAAAAA
GGCCCGTTTTCACAAGACTACATTGATATCTGGTATAGTCGCTATCAAGAATTATCACGTCGGCAATAG

Upstream 100 bases:

>100_bases
TGAAAAGGTTGAATTACCTGCCCGCACGCCATAAAAATCTGGTATAATGTTTAATGAAATTCGATGAAAATTTACCCTCA
TTTTAGAAAGTTGGGTTAAT

Downstream 100 bases:

>100_bases
CTCTGCTGACGGTCTGTCAGCGGCGTAATTAAAGTACAAAGGGAGTGACTCCGTGCTGGGGTGCTCCCTTTTGTGTTCTG
GTTGCGTCTCGACATTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MAREAKGPKEGDFITIKSYKHDGSLHRTWRDTMVLKTSENVLIGCNDHTLVTEDDGRRWVTREPAIVYFHKHYWFNIVAM
IRDNGVSYYCNLASPYVLDKEALKYIDYDLDVKVFPDGERRLLDVDEYEEHGAQWRYSADTDRILKANVKVLVDWIKNKK
GPFSQDYIDIWYSRYQELSRRQ

Sequences:

>Translated_182_residues
MAREAKGPKEGDFITIKSYKHDGSLHRTWRDTMVLKTSENVLIGCNDHTLVTEDDGRRWVTREPAIVYFHKHYWFNIVAM
IRDNGVSYYCNLASPYVLDKEALKYIDYDLDVKVFPDGERRLLDVDEYEEHGAQWRYSADTDRILKANVKVLVDWIKNKK
GPFSQDYIDIWYSRYQELSRRQ
>Mature_181_residues
AREAKGPKEGDFITIKSYKHDGSLHRTWRDTMVLKTSENVLIGCNDHTLVTEDDGRRWVTREPAIVYFHKHYWFNIVAMI
RDNGVSYYCNLASPYVLDKEALKYIDYDLDVKVFPDGERRLLDVDEYEEHGAQWRYSADTDRILKANVKVLVDWIKNKKG
PFSQDYIDIWYSRYQELSRRQ

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1241_LACPL (Q88XG4)

Other databases:

- EMBL:   AL935255
- RefSeq:   NP_784902.1
- ProteinModelPortal:   Q88XG4
- GeneID:   1063015
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_1241
- NMPDR:   fig|220668.1.peg.1036
- HOGENOM:   HBG288296
- OMA:   RTWVTRE
- ProtClustDB:   PRK13662
- BioCyc:   LPLA220668:LP_1241-MONOMER
- HAMAP:   MF_01568
- InterPro:   IPR007295
- InterPro:   IPR016882
- PIRSF:   PIRSF028345

Pfam domain/function: PF04167 DUF402

EC number: NA

Molecular weight: Translated: 21650; Mature: 21518

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAREAKGPKEGDFITIKSYKHDGSLHRTWRDTMVLKTSENVLIGCNDHTLVTEDDGRRWV
CCCCCCCCCCCCEEEEEEECCCCCEEEEECCEEEEEECCCEEEECCCCEEEECCCCCEEE
TREPAIVYFHKHYWFNIVAMIRDNGVSYYCNLASPYVLDKEALKYIDYDLDVKVFPDGER
ECCCEEEEEECCCEEEEEEEEECCCCEEEEECCCCEEECHHHHHHCCCCCEEEECCCCCC
RLLDVDEYEEHGAQWRYSADTDRILKANVKVLVDWIKNKKGPFSQDYIDIWYSRYQELSR
EEECCHHHHHCCCEEEECCCCCHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHHHHHHHH
RQ
CC
>Mature Secondary Structure 
AREAKGPKEGDFITIKSYKHDGSLHRTWRDTMVLKTSENVLIGCNDHTLVTEDDGRRWV
CCCCCCCCCCCEEEEEEECCCCCEEEEECCEEEEEECCCEEEECCCCEEEECCCCCEEE
TREPAIVYFHKHYWFNIVAMIRDNGVSYYCNLASPYVLDKEALKYIDYDLDVKVFPDGER
ECCCEEEEEECCCEEEEEEEEECCCCEEEEECCCCEEECHHHHHHCCCCCEEEECCCCCC
RLLDVDEYEEHGAQWRYSADTDRILKANVKVLVDWIKNKKGPFSQDYIDIWYSRYQELSR
EEECCHHHHHCCCEEEECCCCCHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHHHHHHHH
RQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566