| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is recX
Identifier: 28378009
GI number: 28378009
Start: 1126799
End: 1127608
Strand: Direct
Name: recX
Synonym: lp_1240
Alternate gene names: 28378009
Gene position: 1126799-1127608 (Clockwise)
Preceding gene: 28378008
Following gene: 28378010
Centisome position: 34.06
GC content: 49.14
Gene sequence:
>810_bases GTGTCGTTGACTAAGAAGGTCACGAAGATTGTCGCGCAAAAGCGAGCTGGACGTTATAACATTTATTTAGACGAGCAGTA CGCTTTTCCAATCAGTGAGTCGGTGATGATCAAGTTCCGCGTTTTTAAGGGCATGGAAGTTGATGAACAACTGCAAGCGG CGATGATTGCGGCGGACGATGTCTCCAAGGCGTATACGCGCGCACTGGATTATCTCTCACATCAGTTGCGTACCGAAAAA GAAGTTCATGACAAGTTACGGGATGAAGAAATTGACGAGTCGGTTATCGACGCGACGATGCAACAATTACGTGACATGCG GTTATTGAACGACCAACAGTATGCGGATGCCTTTGTGCGGACGGCTAAACGCACCAGTGACAAGGGGCCACGGGTGATTC GGCAGAACTTACGACAAAAGGGTGTGGGAGAGCAGCTGATTGATGACGCGCTGGCCGGGCAGTTTAGTGCTGAAGAGCAG ATCGATAATGCCAGTGAACTTGCGCGTAAACTGGCAAAACGGTATCACCGCCAAGCTTTTAAGACCATGCAACAGAAAGT TCGCCAAGGTATGATGACGAAGGGATTTGATAATGACACGATTACGGCCGCGATTGCGAGTTTGGCATTAGAACCCGATG AAGATGAACAGTGGGAAGCCCTCGTTGCACAGGGGACGAAGTTGTGGCAACGCAATCGCAAGTATGCGTTTCGTGAACGC ATGATGCGCACGAAACGCAGCCTATTCCAAAAGGGCTTCATGATGGACGATATCAATCGATTTATCGACGAACAAGTTGC TGATGAATGA
Upstream 100 bases:
>100_bases TAAAGCACTTTGGCATCTTAGCACTTCCTGGAGAAATTAGTTGTTTGACGCGGCGATTTTTCGGTAAACTATAGGAGTAA AGATTAAATGATGGGAGTTG
Downstream 100 bases:
>100_bases AAAGGTTGAATTACCTGCCCGCACGCCATAAAAATCTGGTATAATGTTTAATGAAATTCGATGAAAATTTACCCTCATTT TAGAAAGTTGGGTTAATATG
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSLTKKVTKIVAQKRAGRYNIYLDEQYAFPISESVMIKFRVFKGMEVDEQLQAAMIAADDVSKAYTRALDYLSHQLRTEK EVHDKLRDEEIDESVIDATMQQLRDMRLLNDQQYADAFVRTAKRTSDKGPRVIRQNLRQKGVGEQLIDDALAGQFSAEEQ IDNASELARKLAKRYHRQAFKTMQQKVRQGMMTKGFDNDTITAAIASLALEPDEDEQWEALVAQGTKLWQRNRKYAFRER MMRTKRSLFQKGFMMDDINRFIDEQVADE
Sequences:
>Translated_269_residues MSLTKKVTKIVAQKRAGRYNIYLDEQYAFPISESVMIKFRVFKGMEVDEQLQAAMIAADDVSKAYTRALDYLSHQLRTEK EVHDKLRDEEIDESVIDATMQQLRDMRLLNDQQYADAFVRTAKRTSDKGPRVIRQNLRQKGVGEQLIDDALAGQFSAEEQ IDNASELARKLAKRYHRQAFKTMQQKVRQGMMTKGFDNDTITAAIASLALEPDEDEQWEALVAQGTKLWQRNRKYAFRER MMRTKRSLFQKGFMMDDINRFIDEQVADE >Mature_268_residues SLTKKVTKIVAQKRAGRYNIYLDEQYAFPISESVMIKFRVFKGMEVDEQLQAAMIAADDVSKAYTRALDYLSHQLRTEKE VHDKLRDEEIDESVIDATMQQLRDMRLLNDQQYADAFVRTAKRTSDKGPRVIRQNLRQKGVGEQLIDDALAGQFSAEEQI DNASELARKLAKRYHRQAFKTMQQKVRQGMMTKGFDNDTITAAIASLALEPDEDEQWEALVAQGTKLWQRNRKYAFRERM MRTKRSLFQKGFMMDDINRFIDEQVADE
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_LACPL (Q88XG5)
Other databases:
- EMBL: AL935255 - RefSeq: NP_784901.1 - ProteinModelPortal: Q88XG5 - SMR: Q88XG5 - GeneID: 1063021 - GenomeReviews: AL935263_GR - KEGG: lpl:lp_1240 - NMPDR: fig|220668.1.peg.1035 - HOGENOM: HBG535398 - OMA: EHIIADI - ProtClustDB: PRK14135 - BioCyc: LPLA220668:LP_1240-MONOMER - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 31322; Mature: 31191
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTKKVTKIVAQKRAGRYNIYLDEQYAFPISESVMIKFRVFKGMEVDEQLQAAMIAADD CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VSKAYTRALDYLSHQLRTEKEVHDKLRDEEIDESVIDATMQQLRDMRLLNDQQYADAFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH TAKRTSDKGPRVIRQNLRQKGVGEQLIDDALAGQFSAEEQIDNASELARKLAKRYHRQAF HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH KTMQQKVRQGMMTKGFDNDTITAAIASLALEPDEDEQWEALVAQGTKLWQRNRKYAFRER HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MMRTKRSLFQKGFMMDDINRFIDEQVADE HHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLTKKVTKIVAQKRAGRYNIYLDEQYAFPISESVMIKFRVFKGMEVDEQLQAAMIAADD CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VSKAYTRALDYLSHQLRTEKEVHDKLRDEEIDESVIDATMQQLRDMRLLNDQQYADAFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH TAKRTSDKGPRVIRQNLRQKGVGEQLIDDALAGQFSAEEQIDNASELARKLAKRYHRQAF HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH KTMQQKVRQGMMTKGFDNDTITAAIASLALEPDEDEQWEALVAQGTKLWQRNRKYAFRER HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MMRTKRSLFQKGFMMDDINRFIDEQVADE HHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566