Click here to switch to the map view.

The map label for this gene is 28377984

Identifier: 28377984

GI number: 28377984

Start: 1103002

End: 1103835

Strand: Direct

Name: 28377984

Synonym: lp_1211

Alternate gene names: NA

Gene position: 1103002-1103835 (Clockwise)

Preceding gene: 28377983

Following gene: 28377988

Centisome position: 33.34

GC content: 40.17

Gene sequence:

>834_bases
TTGCCAATTAAGTATAGCTCACAGTTTGAGCTGTTATTGTTTTATAGTGATGCTTTCAGTAATCCATGGTTTCTTAATCA
AAAGTTGATATTGGTTGACCACAAAATCAGCAAGCTTCAAGCCAGTCATCATGAAATGCAATTTCAAGTCGAAACTACCG
TAATTGAATGGCAACGCTATCGTATCCATGTTATGAAAGAGCTGAAATTATCGCCAAATACTGTCCAAGAATTCTGCCAG
TTGAATCGTGATGATTTAGTTGTTAGTGATTATTTTGTTGAGAATTGTCGTGAGCACAACGATATAGAACGTGCCATCAT
GTATTGTCGTACTGGGATTCAGCAAGCGGCGCAGGATGACAATTCGACTGTCATGTATCATTGCTATGACCAGTTAGTTT
CACTCTATCGAGATTGTGGTTTGGTGAACGAATACCGGCACGCGTTGTTTGAAGCAATCACCAAATGTGATGCTTTGAAT
TCTAACTGGTACATTCAGCTTCGAGAGCAGTATTCCTCAGCAGATTGGTCGAATGTGCGTCGTCAGATTAGTGCTAGCAT
AATTCCGCAAACTGATTTTGAATGGGACAGTTTTCAAAATGTGTCTGTAAGGCCGTATGTACTGGCTTTGCAGCGAGATG
TGAAGGAAGCAACAACACCTGAGAGTCAGCTTTCAATCATTAAGCAACTAGACTATCTACAAAAGTATCATGGTTCGACC
GGGTTAGAGGTAGCAGATTGGCTTTGGCAGGATTGGTATCGACATTATCCTGAACGTAAAGTGTTGATTGATGCGTTTGA
CGAATGGATTGCACAGATAATTGAAAAGTATTAA

Upstream 100 bases:

>100_bases
GATTGATGAGTGTGCCCGTCTATTCAGGAAGTTACTAACACATGCCAACGGTCATATTCGCTAATCGATCTTTCGGTGGC
TATTTATATATAGTCTGGCA

Downstream 100 bases:

>100_bases
GGAAGATCTGCATTGAAATTTTGTAACAATGAACCGTTCTATAAGTATGCCCTGTTATAAATAACTGAAACTAAATAAGC
TCCGATTTATTCATAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPIKYSSQFELLLFYSDAFSNPWFLNQKLILVDHKISKLQASHHEMQFQVETTVIEWQRYRIHVMKELKLSPNTVQEFCQ
LNRDDLVVSDYFVENCREHNDIERAIMYCRTGIQQAAQDDNSTVMYHCYDQLVSLYRDCGLVNEYRHALFEAITKCDALN
SNWYIQLREQYSSADWSNVRRQISASIIPQTDFEWDSFQNVSVRPYVLALQRDVKEATTPESQLSIIKQLDYLQKYHGST
GLEVADWLWQDWYRHYPERKVLIDAFDEWIAQIIEKY

Sequences:

>Translated_277_residues
MPIKYSSQFELLLFYSDAFSNPWFLNQKLILVDHKISKLQASHHEMQFQVETTVIEWQRYRIHVMKELKLSPNTVQEFCQ
LNRDDLVVSDYFVENCREHNDIERAIMYCRTGIQQAAQDDNSTVMYHCYDQLVSLYRDCGLVNEYRHALFEAITKCDALN
SNWYIQLREQYSSADWSNVRRQISASIIPQTDFEWDSFQNVSVRPYVLALQRDVKEATTPESQLSIIKQLDYLQKYHGST
GLEVADWLWQDWYRHYPERKVLIDAFDEWIAQIIEKY
>Mature_276_residues
PIKYSSQFELLLFYSDAFSNPWFLNQKLILVDHKISKLQASHHEMQFQVETTVIEWQRYRIHVMKELKLSPNTVQEFCQL
NRDDLVVSDYFVENCREHNDIERAIMYCRTGIQQAAQDDNSTVMYHCYDQLVSLYRDCGLVNEYRHALFEAITKCDALNS
NWYIQLREQYSSADWSNVRRQISASIIPQTDFEWDSFQNVSVRPYVLALQRDVKEATTPESQLSIIKQLDYLQKYHGSTG
LEVADWLWQDWYRHYPERKVLIDAFDEWIAQIIEKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33126; Mature: 32994

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKYSSQFELLLFYSDAFSNPWFLNQKLILVDHKISKLQASHHEMQFQVETTVIEWQRY
CCCCCCCCEEEEEEEECCCCCCEEECCEEEEEECHHHHHHHHHHHEEEEEEHHHHHHHHH
RIHVMKELKLSPNTVQEFCQLNRDDLVVSDYFVENCREHNDIERAIMYCRTGIQQAAQDD
HHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
NSTVMYHCYDQLVSLYRDCGLVNEYRHALFEAITKCDALNSNWYIQLREQYSSADWSNVR
CCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCHHHHH
RQISASIIPQTDFEWDSFQNVSVRPYVLALQRDVKEATTPESQLSIIKQLDYLQKYHGST
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
GLEVADWLWQDWYRHYPERKVLIDAFDEWIAQIIEKY
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIKYSSQFELLLFYSDAFSNPWFLNQKLILVDHKISKLQASHHEMQFQVETTVIEWQRY
CCCCCCCEEEEEEEECCCCCCEEECCEEEEEECHHHHHHHHHHHEEEEEEHHHHHHHHH
RIHVMKELKLSPNTVQEFCQLNRDDLVVSDYFVENCREHNDIERAIMYCRTGIQQAAQDD
HHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
NSTVMYHCYDQLVSLYRDCGLVNEYRHALFEAITKCDALNSNWYIQLREQYSSADWSNVR
CCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCHHHHH
RQISASIIPQTDFEWDSFQNVSVRPYVLALQRDVKEATTPESQLSIIKQLDYLQKYHGST
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
GLEVADWLWQDWYRHYPERKVLIDAFDEWIAQIIEKY
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA